Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0475 ATGAAGCAAACAATGATAAGAATGTTACTGCCGTTGCATTTTCTTTCGGTATTGCTTGGTACTTTGGTTTTGATACAAGCTCAGGATCAATCAGGATTCATTAGCATAGATTGTGGTTTACCTGAAAAATCGAGCTATTCTGAGACGAGCACCGGAATAAATTACATTTCAGATGCGAAATTCATAGATACAGGTGTAAGTAAGAAGATATCTCCTATAGGCAATACTGTTCTACAACATCTAGAATATGTGAGGAGCTTTCCTAGTGGAGTGAAAAATTGTTACAAAATAGATGTAACCAATGGTACCAAATATTTAATCAGAGCTTCTTTCTATTATGGTAACTATGATGATTTAAATGATCCCCCACAATTTGATCTTCATTTTGGAGCTAATGCTTGGGATACAGTGAAGTTCCCCAATGTATCACGCATCACCACCAGTGAGATCATTTACACTCCATCACTAGATTACATACAACCATGTCTTGTTAACACAGGCAAAGGAACTCCATTCATTTCATCTATAGAGTTGAGGATTTTGGACAATAAAGCTTATGTCACATACTCATCTAAATCATCAGTATTATCATACTTTTTTCGATTCGATATAGGCTCCATCACAAACTTACAATACAGGTACAAAGATGATGTTTATGACCGCATCTGGTATGTTTTTCAATGGAATGAGATGAAACAAATAAGCACCAAAGATGATATATTAATTCAGAATATTTATAAACCACCATCAGCTGTGATGAACACTGCTGTTACACCAGTAAATGCCAGTGCTCCTTTACAATTTAGTTTCGACGCAGTTAATGTAAATGACCAATACTACACATATTTGCACTTTAGTGAAGTTGAGAAGCTGGCAGAAAATGAAACTAGAGCATTCAATATCACAGTGAATGGAATCCTTATGTATGGACCTGAGATACCTGTATACCGGTCATCAGATACCATATTTAGTACAACACCTTTGACTGGAGCCACAAAGTATATATTTACCCTTTCTAAGACAGAAAATTCAACCCTTCCACCTATCCTGAATGCCTTTGAGGTTTATAAACTAAAAGACTTCTCACAATCAGAAACTCAACAGGAAGATGTTGATACTATGACAAACATCAAGAAGGCCTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTGTGAATTATATGTGGGAAGGCCTAAACTGTAGTATTGATGATGGCAATAACCCCCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGACAGGGGAGATATCATCTTCCATATCAAAGCTCACTATGTTACAGTACTTGGATTTATCAAACAATAGCTTAATTGGTCCTTTACCTGAATTTCTGATGCAACTACGGTCACTAAAAGTCTTAAATGTGGGGAAGAATAAACTTACAGGGTTAGTTCCAAGTGGACTCCTTGAGAGATCAAAAACAGGTTCACTATCACTGAGTGTGGATGATAACCTTGGTCTTTGTATGACGGAATCTTGCAAAAAGAAGAACATTGTTGTACCACTTGTTGCATCGCTTTCAGCATTAGTTGTAATCCTTTTGATTTCTCTTGGATTTTGGATATTCAAAAGACAAAAAGTTGTAGCCACGTCTTCAAATTCAAAGAAAAGGGGTTCAATGAAATCAAAACATCAAAAATTCAGTTACACTGAAATTCTCAATATCACTAATAACTTTAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCACTCTACAAGATCAAACTCAAGTCGCTGTTAAGCAACTTTCACCATCATCAATGCAAGGTTATAATGAATTTCAATCGGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCCCTCCTTGGATATTGTGATGAAGTTGAAACCAAAGCATTGATTTATGAATATATGGCTAAAGGAAATCTCCAACAACATTTATTAGTGGAAAATTCAAATATCTTAAATTGGAAGGAGAGGCTTAACATTGCAGTTGACGTAGCACATGGATTGGATTATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAGCCTTCCAACATACTACTTGATGAGAACTTGCATGCAAAGATTGCTGATTTTGGTCTAAGTAGAGCTTTTGGTAACGTTGATGATTCTCATATATCCACACGCCCTGCTGGTACATTTGGTTACGTTGATCCATTTCAGATAGCAGGAACTACAAATAAGAAAAATGATATCTATAGCTTTGGTATAATTCTATTTGTGTTGATCACCGGAAAGAAAGCACTAGTGAGAGAATCTGGAGAAGCCATTCACATACTTCAATGGGTTATTCCCATAGTTAAAAGAGGAGACATTCAAAACATTGTTGATAAGAAGTTGCAGGGTGAATTCAGCATCAGTTCTGCATGGAAAGTTGTTGAGATAGCCATGTCATGCATTTCACAAACTGTAGATGAGAGGCCAGACACAAGCCAAATATTGGCAGAGCTAAAGGAATGTCTATCTTTGGAGATGGTTCAGAAAAATATTGGAAGCCCAAGAGCTAAAGATGAATTGATTTCTATAGCTACTGTATCAGAAACCACTATTTTTGCTAGATAA 2625 0.3627 MKQTMIRMLLPLHFLSVLLGTLVLIQAQDQSGFISIDCGLPEKSSYSETSTGINYISDAKFIDTGVSKKISPIGNTVLQHLEYVRSFPSGVKNCYKIDVTNGTKYLIRASFYYGNYDDLNDPPQFDLHFGANAWDTVKFPNVSRITTSEIIYTPSLDYIQPCLVNTGKGTPFISSIELRILDNKAYVTYSSKSSVLSYFFRFDIGSITNLQYRYKDDVYDRIWYVFQWNEMKQISTKDDILIQNIYKPPSAVMNTAVTPVNASAPLQFSFDAVNVNDQYYTYLHFSEVEKLAENETRAFNITVNGILMYGPEIPVYRSSDTIFSTTPLTGATKYIFTLSKTENSTLPPILNAFEVYKLKDFSQSETQQEDVDTMTNIKKAYGVARNWQGDPCGPVNYMWEGLNCSIDDGNNPPRITSLNLSSSGLTGEISSSISKLTMLQYLDLSNNSLIGPLPEFLMQLRSLKVLNVGKNKLTGLVPSGLLERSKTGSLSLSVDDNLGLCMTESCKKKNIVVPLVASLSALVVILLISLGFWIFKRQKVVATSSNSKKRGSMKSKHQKFSYTEILNITNNFKTIIGEGGFGKVYFGTLQDQTQVAVKQLSPSSMQGYNEFQSEAQLLMIVHHRNLVSLLGYCDEVETKALIYEYMAKGNLQQHLLVENSNILNWKERLNIAVDVAHGLDYLHNGCKPPIMHRDLKPSNILLDENLHAKIADFGLSRAFGNVDDSHISTRPAGTFGYVDPFQIAGTTNKKNDIYSFGIILFVLITGKKALVRESGEAIHILQWVIPIVKRGDIQNIVDKKLQGEFSISSAWKVVEIAMSCISQTVDERPDTSQILAELKECLSLEMVQKNIGSPRAKDELISIATVSETTIFAR* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0475 874 SMART serkin_6 570 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0475 874 SUPERFAMILY L domain-like 396 527 - -
Mal5g0475 874 CDD STKc_IRAK 576 840 - -
Mal5g0475 874 Pfam Leucine Rich Repeat 439 456 IPR001611 GO:0005515
Mal5g0475 874 Gene3D Ribonuclease Inhibitor 371 494 IPR032675 -
Mal5g0475 874 PANTHER OS07G0107800 PROTEIN-RELATED 22 871 - -
Mal5g0475 874 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524
Mal5g0475 874 Pfam Malectin-like domain 36 357 IPR024788 -
Mal5g0475 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 690 702 IPR008271 GO:0004672|GO:0006468
Mal5g0475 874 Gene3D Transferase(Phosphotransferase) domain 1 646 858 - -
Mal5g0475 874 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 22 871 - -
Mal5g0475 874 Pfam Protein tyrosine and serine/threonine kinase 572 838 IPR001245 GO:0004672|GO:0006468
Mal5g0475 874 Gene3D Phosphorylase Kinase; domain 1 551 645 - -
Mal5g0475 874 SUPERFAMILY Protein kinase-like (PK-like) 551 838 IPR011009 -
Mal5g0475 874 ProSiteProfiles Protein kinase domain profile. 570 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0475 Mal-Chr5 7038272 7043230 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0475 6 850 Receptor kinase-like Gene Family AT1G05700 46.847 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mal5g0475 Malectin_like 3.2e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0475 - - mtr:MTR_8g014700 1338.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0475 5 7038272 7043230 Mal5g0475 5 7038272 7043230 ECH