Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0465 ATGTGGCAAAGAAGCCACAATTGTTCTTTAGAAGAGAGGAAATTGGAGCTTAGACTTGGTCCACCTGGTGAAGAAGAGTTTGTCAATGAAAAAAGCATGAAGAATGTCAAAAAAGAAAGTGATGAAGAATCATCACTCACTCTTGGTTATGCTAAAGCTTCATCATTTCTTAAGCTCTCATCAATGCAAGTGATGGAAAAGGATGGTGAGAAGAATAAATTCTCACCTTCTTCAAACACAGCTTTGCCAAACAGGTCTCAGAAAAGAAATGCTGCTAGTTCAGTAGTAGGTTGGCCTCCAATTAGATCTTTCCGGAAGAACATTGCAAGTGGAAGCTCTTCTAAGCCGCCGACCGAGTCGCAGCATATGGTTCAAGACAAGGTTGCTACTAGTAACAAACCTATTAGCAACTCTGGTAAAGGCTTGTTTGTGAAGATCAATATGGATGGAGTTCCTATTGGGAGAAAAATTGATATCAATGCTTATGATAGCTATGAAAAACTTTCATCTGCTGTTGATGACCTATTTAGAGGTCTCCTTGAAGAAATAAATATATCTCGTGGAATTAACAAGAAGCAAGAGGAAGAAGATAAAGGCATCAAAGGATCATTGATTAAAAGTGGAGAATATACTCTTGTTTATGAAGATAATGAAGGAGACAAGATGCTTGTAGGGGACGTGCCGTGGCACATGTTTGTATCAACAGTGAAGAGGCTGCGTGTGTCCAAGAGTTCTGACCTTCCTGCTTTTAACCTTGGTAGCAAGAAAGACTAG 774 0.3953 MWQRSHNCSLEERKLELRLGPPGEEEFVNEKSMKNVKKESDEESSLTLGYAKASSFLKLSSMQVMEKDGEKNKFSPSSNTALPNRSQKRNAASSVVGWPPIRSFRKNIASGSSSKPPTESQHMVQDKVATSNKPISNSGKGLFVKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINISRGINKKQEEEDKGIKGSLIKSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSDLPAFNLGSKKD* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0465 257 MobiDBLite consensus disorder prediction 106 133 - -
Mal5g0465 257 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 4 256 - -
Mal5g0465 257 ProSiteProfiles PB1 domain profile. 141 244 IPR000270 GO:0005515
Mal5g0465 257 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 256 IPR003311 GO:0005634|GO:0006355
Mal5g0465 257 MobiDBLite consensus disorder prediction 15 45 - -
Mal5g0465 257 SUPERFAMILY CAD & PB1 domains 133 242 - -
Mal5g0465 257 Gene3D - 136 255 - -
Mal5g0465 257 Pfam AUX/IAA family 15 247 IPR033389 -
Mal5g0465 257 MobiDBLite consensus disorder prediction 66 133 - -
Mal5g0465 257 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0465 Mal-Chr5 6857920 6860878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0465 144 241 B3 DNA Binding Superfamily AT4G23980 34.694 1.65e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mal5g0465 AUX_IAA 1e-67 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0465 5 6857920 6860878 Mal4g0336 4 2446483 2449985 ECH
Mal5g0465 5 6857920 6860878 Mal5g0465 5 6857920 6860878 ECH
Mal4g0336 4 2446483 2449985 Mal5g0465 5 6857920 6860878 PCT