Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0453 ATGTTCTTCCTATATCACTTATATTTTCAGTCAATTAACATAAGTTTTTTATTTATTTATTTATTTATTGCATTAGTGGAAGAAGTATTTGTATCTTCCGATGATGAGGAAATCAGAGAAGGAAATAATAAATGTGATGATAGTTTAGAAGAAAATATTGTCCATGAAGCTGAAAAACCTCAAGTTGGAACTATATTTAGCTCTAAAGATGAACTTACAGAGTATTACATGAGTTATGCTCGATCTATTGGTTTTGGGGTTACTAAACTTAGTAGCAAAAATGCAGATGATGGAAAAAAATATTTTACTCTAGCATGTAGTCGTGGAACAAAGTATGTAAGTAAATCAAAGAAGCTTTTGAACCCAAATCCTATAACAAAAACCCAGTGCAAGGCTAGATTGAATGCATGTATTTGTTTAGATGGAACAGTTATTATTTCAAAAATTGTTCTTGAGCATAATCATGATCTAAGCCCTAGCAAAGCGCGCTATTTTAGAAGTAATAAGAATATGGACCCTCAATTGAAAAGGAGGATAGAACTCAATGATCAAGCTGGAATAAATGTAAGCAGAAATTTCCGATCTTTGGTTGTTGAAGCGAATGGGTATGAGAATATGACATTTGGTGAAAAGGATTGTAGAAATTATATAGATAAAGTTAGGAGACTACGACTTGGAGTTGGAGATGCTGAGGCGATTCAGAATTATTTTGTTAAAATGCAAAAGCAAAATAGCCAATTCTATTATGTCATAGACATTGATGATGAAAGTCGCTTACGAAATGTATTTTGGGCAGATGCGAGATGTAGGGCTGCATATGAATATTTTGGTGAAGTCGTAACATTTGACACTACTTACTTAACAAATAAATATGACATGCCTTTTGCCCCTTTTGTTGGAGTAAACCATCATGGTCAATCTGTGTTGTTGGGCTGTGCTTTATTGTCGAATGAGGATACTAAGACCTTTACTTGGTTGTTCAACACATGGTTAGAATGCATGAATGGACGTGCTCCAATTTCCATCATTACTGATCAAGATAAAGCCATGAAAAATGCAATTGAGGTCGTTTTTCCAAAAGCTCGTCATCGATGGTGTTTGTGGCATATAATGAAAAAGGTACCAGAAAAGCTAGGTAGACATTCTGATTATGAGTCTATCAAAGCACTTCTACATGATGTTGTATATGATTCTTTGAGTAAAAGTGATTTCATGGAAAATTGGGAAAGAATGATTGAAGATTTTGAACTTCAGGATAATGAATGGTTGAAGGGGCTTTTTGATGAAAGAAATCGTTGGGTTCCTACATATGTGAGAGACACATTTTGGGCTGGAATGTCAACGACTCAAAGAAGTGAAAGTATGAACTCATTTTTTGATGGCTATGTAAATTCAAAGACAACATTGAAGCAATTTGTTGAACAATATGACAATGCATTGAGAGATAAAGTTGAAAAGGAAAACAAGGCTGATTTTGGTTCATTTAATACAATGATAGCTTGTGTAAGTCATTTTGGCTTTGAGCTCCAATTCCAGAAAGCATTCACCAATGCAAAATTCAAAGAATTTCAAGTGGAGGTTGCTTCTATGATTTATTGTCATACTTGCTTTGAGAAAGTGGAAGGATCAAATTCTATATATTCGGTTATAGAAAGCAAGAAAAAATTTGACAAAATCAAGGACATAGTGTTTGAGGTATCATTCAATGAGGAAGACTTCGAGTTACAATGTATGTGTTGTTTGTTTCAATTCAAAGGTATTTTGTGCAGGCACATCCTTTGTGTGCTTAAGCTAGCAGGCAAAACAGAGTCATTGCCGTCCTCTTATATTTTCTCACAGTGGAGGAAGGATATAAAGCGAAGACATACCCTTATTAAATGTGGTTTTGATCATTTAGTTGGAAATGTTGAATTGCAAAGAGTTGATAAAGCTTGTAGTGCCTTTTACGAAGTTGCTTCTGTGGTGATAAATACCGATAATGATTTGTCAAAAATGATGAATCGGATCAAAGAAATAAAAAATGAGTTTACCTCTAAAGAAACATCCCCTGGCATTGTAGAAGAAGATGGTTCAGTTCAAAATCAAGTGACTAAAATTCTTGACCCTGTACCGACTCGAAGTAAAGGGCGTCCTCCGTCAAAAAGGAAGTCCTCTAAAGTTGATCAAATTGTGCAGAAACTTGGAAATAGAAAGAGGACCCAAAAAAGAAGGCAAGAAAGTGGAAATCGTCAAAGTCAACAAGAGGTAGTTTTAAGAACTGTGTACATCTAA 2271 0.3457 MFFLYHLYFQSINISFLFIYLFIALVEEVFVSSDDEEIREGNNKCDDSLEENIVHEAEKPQVGTIFSSKDELTEYYMSYARSIGFGVTKLSSKNADDGKKYFTLACSRGTKYVSKSKKLLNPNPITKTQCKARLNACICLDGTVIISKIVLEHNHDLSPSKARYFRSNKNMDPQLKRRIELNDQAGINVSRNFRSLVVEANGYENMTFGEKDCRNYIDKVRRLRLGVGDAEAIQNYFVKMQKQNSQFYYVIDIDDESRLRNVFWADARCRAAYEYFGEVVTFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSNEDTKTFTWLFNTWLECMNGRAPISIITDQDKAMKNAIEVVFPKARHRWCLWHIMKKVPEKLGRHSDYESIKALLHDVVYDSLSKSDFMENWERMIEDFELQDNEWLKGLFDERNRWVPTYVRDTFWAGMSTTQRSESMNSFFDGYVNSKTTLKQFVEQYDNALRDKVEKENKADFGSFNTMIACVSHFGFELQFQKAFTNAKFKEFQVEVASMIYCHTCFEKVEGSNSIYSVIESKKKFDKIKDIVFEVSFNEEDFELQCMCCLFQFKGILCRHILCVLKLAGKTESLPSSYIFSQWRKDIKRRHTLIKCGFDHLVGNVELQRVDKACSAFYEVASVVINTDNDLSKMMNRIKEIKNEFTSKETSPGIVEEDGSVQNQVTKILDPVPTRSKGRPPSKRKSSKVDQIVQKLGNRKRTQKRRQESGNRQSQQEVVLRTVYI* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0453 756 Pfam MULE transposase domain 279 373 IPR018289 -
Mal5g0453 756 Coils Coil 655 675 - -
Mal5g0453 756 MobiDBLite consensus disorder prediction 698 748 - -
Mal5g0453 756 PANTHER OS03G0843700 PROTEIN 34 681 - -
Mal5g0453 756 MobiDBLite consensus disorder prediction 714 742 - -
Mal5g0453 756 Pfam FAR1 DNA-binding domain 74 158 IPR004330 -
Mal5g0453 756 ProSiteProfiles Zinc finger SWIM-type profile. 564 600 IPR007527 GO:0008270
Mal5g0453 756 SMART 26again6 575 602 IPR006564 GO:0008270
Mal5g0453 756 Coils Coil 469 489 - -
Mal5g0453 756 Pfam SWIM zinc finger 571 596 IPR007527 GO:0008270
Mal5g0453 756 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 681 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0453 Mal-Chr5 6613566 6615836 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g0453 MULE 1.1e-36 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0453 - - cam:101506732 1025.77