Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0450 ATGGGGATGCTTCCTCACAGACACAGATCAATGAGGGCAATGGTTATGGTGTTGCTAATTCTAGCCGTAGGATTATTATTATTAGCCGAAGCAGATCTAGATTCCCAACGAGCTGCATTGCTAGCTCTCCGTTCTTCTGTCGGCGGTCGAACTCTCTTTTGGAACGCCACCAATCAGACTCCCTGCAACTGGGCTGGCGTCCAATGCGACCACGACCGCGTCGTCGAGCTTCACCTTCCCGGCGTTGCTCTTTCTGGCCAAATACCCACCGGCATCTTCTCCAATCTCACCCACCTCCGAACTCTCAGTCTCCGTTTCAACGCTCTCACTGGTTCACTCCCTTCAGATCTCGCCTCCTGCGTCAACCTCAGGAACCTTTACATACAGCGTAACCTTCTCTCCGGCCAAATCCCTGACTTCCTCTTCACCTTACCGGACATGGTTCGACTCAACATGGGCTTCAACAACTTCTCAGGTCCCATTTCCACCTCATTCAACAACTTCACCAGACTAAAAACCCTCTTCCTTGAAGACAATCAGCTTTCAGGTTCCATCCCGGAATTGAACGCCTTGAGCCTCGACCAGTTCAATGTCTCCAACAATGTCTTAAACGGCCCTGTTCCAGTCAAGCTCCAGACGTTCACTCAAGATTCCTTTTTGGGTAATTCTCTCTGCGGTCGTCCCCTTTCACTCTGCCCCGGCACCGGCACCGGCACCGATGCCTCTTCCCCTTTCTCTGCCGCCGACGGTAACAACAAGAAGAGCAACAAGTTGTCTGGCGGAGCCATTGCCGGAATCGTCATTGGATCTGTAGTGGGTCTTCTTTTGCTCGCTTTCCTTTTGATCTTCTTGTGCAGGAATAAGAGTAGCAAGAAGACCAGTGCTGTTGATGTTGCTACCGTCAAGCATCCTGAATCCGAAGTTCCTCTCGACAAGTCTATTTCTGACTTGGAGAACAACGGCAATGGATACTCTACATCTGCTGCTGCAGCGGCAGCGGCGGTTGCAGTCAACAAAGTTGAAGCAAATGGCAATGGAAACACTGCTGCTGCTGGTGGAGCTAAGAAGTTGGTGTTTTTTGGGAATGCAGCGAGGGCTTTTGATCTGGAGGATCTGTTGAGAGCTTCGGCGGAGGTTTTGGGTAAAGGGACCTTTGGGACGGCTTACAAGGCAGTTTTGGAGTCGGGGCCGGTGGTGGCGGTGAAAAGGTTGAAGGATGTGACCATAACTGAGAAGGAGTTCAGAGAGAAGATTGAAGCGGTGGGAGCCATAGATCATCAGAGTTTGGTACCTCTAAGGGCTTACTATTTCAGCAGAGATGAGAAACTCCTTGTTTATGATTACATGTCAATGGGAAGCCTCTCTGCACTTTTGCATGGAAACAAAGGAGCAGGTAGGACACCGCTGAATTGGGAAATGAGATCAGGAATTGCACTAGGAGCAGCCAAAGGCATTGAGTACCTTCATTCACAAGGGTCTAGTGTTTCCCATGGAAACATAAAGTCATCTAATATACTCTTAACCAAATCATATGATGCAAGAGTGTCTGATTTTGGGCTTGCACAGCTTGTTGGTCCTTCCTCTACCCCAAACCGTGTCGCTGGGTACCGTGCACCAGAAGTAACTGATGCTCGCAAAGTATCTCAAAAGGCAGATGTGTACAGTTTTGGCGTATTGCTCTTGGAACTTCTGACAGGGAAGGCACCTACACATGCTCTCCTAAATGAAGAAGGAGTAGACCTCCCCAGATGGGTTCAATCCGTGGTTAGAGAAGAGTGGACGTCTGAGGTCTTTGATCTTGAGCTCCTTAGGTATCAGAATGTTGAAGAGGAAATGGTTCAGCTGCTGCAACTTGCTGTTGATTGTGCAGCACAATACCCTGATAAGCGCCCTTCAATGTCTGAAGTGGTACGGAGCATAGAAGAATTACGTCGATCTAGCTTGAAAGAGGACCAAGACCAAATCCAACATGACCACAATGATATAGAATTGTAG 1995 0.4897 MGMLPHRHRSMRAMVMVLLILAVGLLLLAEADLDSQRAALLALRSSVGGRTLFWNATNQTPCNWAGVQCDHDRVVELHLPGVALSGQIPTGIFSNLTHLRTLSLRFNALTGSLPSDLASCVNLRNLYIQRNLLSGQIPDFLFTLPDMVRLNMGFNNFSGPISTSFNNFTRLKTLFLEDNQLSGSIPELNALSLDQFNVSNNVLNGPVPVKLQTFTQDSFLGNSLCGRPLSLCPGTGTGTDASSPFSAADGNNKKSNKLSGGAIAGIVIGSVVGLLLLAFLLIFLCRNKSSKKTSAVDVATVKHPESEVPLDKSISDLENNGNGYSTSAAAAAAAVAVNKVEANGNGNTAAAGGAKKLVFFGNAARAFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVVAVKRLKDVTITEKEFREKIEAVGAIDHQSLVPLRAYYFSRDEKLLVYDYMSMGSLSALLHGNKGAGRTPLNWEMRSGIALGAAKGIEYLHSQGSSVSHGNIKSSNILLTKSYDARVSDFGLAQLVGPSSTPNRVAGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVVRSIEELRRSSLKEDQDQIQHDHNDIEL* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0450 664 ProSiteProfiles Protein kinase domain profile. 374 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0450 664 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Mal5g0450 664 Gene3D Phosphorylase Kinase; domain 1 342 448 - -
Mal5g0450 664 CDD STKc_IRAK 380 643 - -
Mal5g0450 664 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 658 - -
Mal5g0450 664 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Mal5g0450 664 SUPERFAMILY Protein kinase-like (PK-like) 378 640 IPR011009 -
Mal5g0450 664 Pfam Protein kinase domain 377 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0450 664 Gene3D Transferase(Phosphotransferase) domain 1 449 663 - -
Mal5g0450 664 Pfam Leucine rich repeat 87 133 IPR001611 GO:0005515
Mal5g0450 664 ProSiteProfiles Leucine-rich repeat profile. 170 192 IPR001611 GO:0005515
Mal5g0450 664 PANTHER OS05G0588300 PROTEIN 16 658 - -
Mal5g0450 664 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Mal5g0450 664 SUPERFAMILY L domain-like 54 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0450 Mal-Chr5 6520648 6523044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0450 32 644 Receptor kinase-like Gene Family AT1G48480 64.904 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal5g0450 Pkinase 5.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0450 - - gmx:100818955 995.727