Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0429 ATGTGGATGGTGGGTTACAATGAAGGTGGTGAGTTCAACATGGCTGATTATCCATTCAGTGGAAGGAAACTAAGGCCTCTCATGCCAAGACCAGTCCCTACTACTTCTTCTTCTAACAACACTTCAACTATAACTCCAACTTCCTTAAACCGCATTCATGGTGGGAATGATTTGTTTTCACAATATCATCATCATCATCACAATCTGCAGCAAGGAGATCAGAGCAAGAGATCAGAGTTGAATAATCCAGCAGTTGTGGTGAGCTCAAGGTGGAATCCAACACCAGAACAGTTAAGAGCACTTGAAGAACTGTATAGAAGAGGAACAAGAACACCTTCTGCTGAGCAAATCCAACAAATCACTGCACAACTTAGAAGGTTTGGAAAAATTGAAGGCAAAAATGTTTTCTATTGGTTTCAGAACCACAAAGCCAGAGAAAGGCAGAAACGACGCCGTCAAATGGAATCAGCTGCTGAACAGTTTGATACTCATACTACTCTTGAAAAGAAAGACTTAGGCGCAAGTAGGACAGTGTTTGAAGTTGAACACACCAAAAACTGGCTACCCTCTACAAATTCCAGTACCAGTACTCTTCCTCTTGCAGAGGAATCTGTTTCAATTCAAAGGGCAGCAGCAGCAGCAGCAGCAAAAGCAGATGGATGGCTCCAATTCGATGAAGCAGCAGAATTACAGCAAAGAAGAAACTTTATGGAAAGGAATGCCACGTGGCATATGATGCAGTTAACTTGTCCTCCTACCCTCTTAAACACTACACAAACAACAGCTAGCATGGCCACCACAACCACAGTAACAACTAGACCTATGGACCCAAAACTCATCAAGACCCATGGCCTCAACTTCTTCATTTCACCTCACACTCACACATACAAAGAAAGAGAAAACGCTTTTATCCACTTAAGCAGTAGTATCAACAATACTACTCATCAGGATCATCATCATTCTTTGGAATCTGATCAAACCCTTCAACTTTTCCCAATAAGGAATGATGATCATCATCATAACATTATTAACCAACACAAAGAGACAGAGATATCAGCTTCAGCAATGAATGCACCCAACCAGTTTATTGAGTTTCTTCCGTTGAAAAACTGA 1113 0.4133 MWMVGYNEGGEFNMADYPFSGRKLRPLMPRPVPTTSSSNNTSTITPTSLNRIHGGNDLFSQYHHHHHNLQQGDQSKRSELNNPAVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEQFDTHTTLEKKDLGASRTVFEVEHTKNWLPSTNSSTSTLPLAEESVSIQRAAAAAAAKADGWLQFDEAAELQQRRNFMERNATWHMMQLTCPPTLLNTTQTTASMATTTTVTTRPMDPKLIKTHGLNFFISPHTHTYKERENAFIHLSSSINNTTHQDHHHSLESDQTLQLFPIRNDDHHHNIINQHKETEISASAMNAPNQFIEFLPLKN* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0429 370 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 24 370 IPR044555 GO:0003700|GO:0099402
Mal5g0429 370 ProSiteProfiles 'Homeobox' domain profile. 94 149 IPR001356 GO:0003677
Mal5g0429 370 SMART HOX_1 86 153 IPR001356 GO:0003677
Mal5g0429 370 Pfam Homeodomain 89 148 IPR001356 GO:0003677
Mal5g0429 370 Gene3D - 87 149 - -
Mal5g0429 370 PANTHER WUSCHEL, PUTATIVE-RELATED 24 370 - -
Mal5g0429 370 SUPERFAMILY Homeodomain-like 89 155 IPR009057 -
Mal5g0429 370 CDD homeodomain 90 150 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0429 Mal-Chr5 6322485 6324767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0429 1 370 Wox Gene Family AT3G18010 37.157 2.50e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mal5g0429 Homeodomain 1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0429 - - gmx:100777274 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0429 5 6322485 6324767 Mal5g0429 5 6322485 6324767 ECH