Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0412 ATGGAAAAATTTCCTCCTCATTCGTTCTCAATGAAGAACGAATCTTCGTTAGTATCTCATCCTGGTGCTTCTACCCAATCTAGCACTGATGCACATATGATGGCGTACATGGAACGTCTTGTTATTGAACTTAGCAATCCCGATCTCCGAGAAAACGCTCTTCGTGTTCTCTCCAAGAGGAATGAGTTATTTCAGGAACTTGCACCTTTATTATGGAGTTCTTTTGGTACTATTACAGTACTTTTACAGGAAATAACTTCAATATATTGTACTCTTCCACCAATTACTCGTACACCAAAACAGTCATCTCCACCGACTCTTACACTAACACAATCAACTCGAGTGTGCAATGTTCTTGGACTACTTCAGTGTGTAGCATCTCACTCTGATACAAGGATGCCATTCCTGAATGGTTAA 417 0.4005 MEKFPPHSFSMKNESSLVSHPGASTQSSTDAHMMAYMERLVIELSNPDLRENALRVLSKRNELFQELAPLLWSSFGTITVLLQEITSIYCTLPPITRTPKQSSPPTLTLTQSTRVCNVLGLLQCVASHSDTRMPFLNG* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0412 138 PANTHER BNAA05G20110D PROTEIN 8 137 - -
Mal5g0412 138 Pfam Cell differentiation family, Rcd1-like 40 137 - -
Mal5g0412 138 PANTHER UNCHARACTERIZED 8 137 - -
Mal5g0412 138 Gene3D - 29 138 IPR011989 -
Mal5g0412 138 MobiDBLite consensus disorder prediction 1 26 - -
Mal5g0412 138 MobiDBLite consensus disorder prediction 9 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0412 Mal-Chr5 6160178 6163598 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Mal5g0412 Rcd1 2.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0412 K12606 - gmx:100801266 137.502