Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0378 ATGGGGAGGAAGAAGAAGCGCGTTGCTTCAAAGGTTTGGTGTTATTACTGCGATCGCGAATTCGATGACGAGAAGATCTTGGTTCAGCATCAGAAAGCCAAGCATTTCAAGTGCCATGTTTGTCATAAGAAGCTTTCCACTGCTGGTGGCATGTCCATTCACGTTCTTCAGGTCCACAAGGAAAACGTCACCAAGGTGCCAAATGCGAAACCTGGAAGAGAGAGCACAGATATTGAAATATACGGAATGCAGGGGATACCGCCAGATGTCTTGGCTGCTCATTATGGAGATGAAGATGATGATGTTCCATCAAAGACAGCCAAGGTGGATATCCCATCAACCCCATTTGCAGGTGGAATGGTGCCACCTCCTATGGGTACCGGATATCCTCCACGATCAACCATGGGCCCAATTCGACCAATGTATAATCCTGCTGTACCAGTCCCTCCTAATGCTTGGGGAGTGGTTCCACCTCGACCGCAGCCATGGTTTCCCCAGCCTCCAGCTGTTTCAATTCCTCCTTCGGTTCAATACCCACAACAACCATTATTTCCTGTTCAGAATGTGAGGCCTCCATTGCCATCAACTACTTCTCCTGCACTACAAACTCAGATTAATCCTCCTGGACTGCCTACATCTGTACCTCCTGTCCCAGTTTCACAGCCTTTATTTCCTGTTGTTGGAAATAACCACACGACAAGTTCACCATTTTCTGCTGCACCTCTGTCTTCAAGTGTTCCATCAATAACTCCTGTGCTTCCTGCAAACATCCCTACTGATGCACATTTGGGCATAAACTCTTCTGTGACAAGCAGTTATCAAGCAATAGGGATTCCAGGTGCGATAGCAAGCAACTCACATTCTTACGCTTCTGGCCCAAATACCGGTGGTCCTTCAATTGGACCTCCCCCAGTAATCTCAAACAAAGCTCCTGCTTCTCAGCCTGCCACTAACGAAGTCTACTTAGTTTGGGATGACGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTTTAACAAAGTATCAGGTGCATGATGAAAGTAGCCAGATGAGCTCCATTGATGCAGCCATAGATAAGAGGATACTTGAGAGCAGGCTAGCTGGTCGCATGGCATTTTAG 1119 0.4727 MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGMVPPPMGTGYPPRSTMGPIRPMYNPAVPVPPNAWGVVPPRPQPWFPQPPAVSIPPSVQYPQQPLFPVQNVRPPLPSTTSPALQTQINPPGLPTSVPPVPVSQPLFPVVGNNHTTSSPFSAAPLSSSVPSITPVLPANIPTDAHLGINSSVTSSYQAIGIPGAIASNSHSYASGPNTGGPSIGPPPVISNKAPASQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQMSSIDAAIDKRILESRLAGRMAF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0378 372 Gene3D Classic Zinc Finger 2 66 - -
Mal5g0378 372 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Mal5g0378 372 SMART c2h2final6 12 35 IPR013087 -
Mal5g0378 372 SMART c2h2final6 36 59 IPR013087 -
Mal5g0378 372 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Mal5g0378 372 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Mal5g0378 372 PANTHER ZINC FINGER PROTEIN 207 1 372 - -
Mal5g0378 372 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 372 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0378 1 352 C2H2 Transcription Factor Family AT1G30970 63.536 5.10e-144 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal5g0378 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0378 - - gmx:100819009 613.224