Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0361 ATGGTGGGGAAGGATCAAACACCAAAGGAAAGGAATAGAGATTGGATTAGAGCTCTTATGAATACTAGCTCTGGTTATTGTGATGATCATCGTGATCTTCGATCTAATGAGAAGAATACTTTCTGTGTAGATTGTGCTGTTAGATTCTGTAGGCACTGTAAGGAAGCTCATTCTAGTCATAGAAGGTTTCAGATTTACCGATACTCCTATCAGGATGTTTTTCGACATTCCGAACTGCAGAAGCACTTTGACTGCTCAAATATTCAGACTTACATATCCAATAAAGATAGGATTGTGCATCTAAAACCCCGGCCTCCAATCTTTAAATCTAAAGCTGGTGATCAATGCCCTGAATCTAAATCCAAAGAAAACAACTTATCAGCAAGATTTAAGTCGGGAGGTAGTACATGCGAAGAATGTGGAAAACACTTGCAAGATGAGCATAGTCGCTGGTGCTCAATTATATGCAAGATCTCAGTGCTTCCAGGGGAGCCTCAAAGCCGAGGTCCAAATCATCACACAAAAAGGAGTTTAGTTGACTCTTTCAACCAAAGTGGTAGATGCATCATCACTCCAAAAACTGAAGCTATTGACTTTACTACGAGTGATAACCTTAATTCGGAACCGGAGTCATCTATTTCTGAAGCTGAGCCATGTGGGCGGGTTGAAGTTGTGAATTTCAGAAAGCGCCCGAGAAAAACCACTCCTCAGAGGCCTGTCTTTGTTTTTGTTTCTTAG 738 0.4106 MVGKDQTPKERNRDWIRALMNTSSGYCDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSSHRRFQIYRYSYQDVFRHSELQKHFDCSNIQTYISNKDRIVHLKPRPPIFKSKAGDQCPESKSKENNLSARFKSGGSTCEECGKHLQDEHSRWCSIICKISVLPGEPQSRGPNHHTKRSLVDSFNQSGRCIITPKTEAIDFTTSDNLNSEPESSISEAEPCGRVEVVNFRKRPRKTTPQRPVFVFVS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0361 245 Pfam PLATZ transcription factor 67 158 IPR006734 -
Mal5g0361 245 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Mal5g0361 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 239 - -
Mal5g0361 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 239 - -
Mal5g0361 245 SMART bboxneu5 22 65 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0361 Mal-Chr5 5608186 5610001 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mal5g0361 PLATZ 5.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0361 - - gmx:100815813 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0361 5 5608186 5610001 Mal5g0361 5 5608186 5610001 ECH