Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0354 ATGTGTTCCTTCAGCTTCAGAGGAGAGGACACGCGTGACAACTTCATCAGTCATCTTTATGCTGAACTATGCAGGAAACATATTGAAACCTTCATAGATTACAAACTTGGAAGAGGCGATGAGATTTCTCCGGCACTCTACAAAGCAATCGATGAATCAATGATTTATGTTGTCGTTTTGTCTGAGAACTATGCTTCTTCCACATGGTGTTTGGATGAACTCACACATATCCTCCAATGCAAAGAGAAATATAGTGGAAGGCATGTGATTCCGGTCTTCTATAAGGTGGATCCCTCAGATGTTAGACATCAAAGACAGAGTTATGCAGAAGCTTTGGTTAAGCATCAACGTCGATTTAAGGATGATCAAGTGAATGCATGGAAAGCTGCTCTAACCCAAGTAGCTGGACTCTCTGGTTGGGATTCACAAGTAACCAGACCAGAACACACACTTATTGAAGACATTGTGAAAGATATTTTAAGAAAATTGAATTTGAATCGTTCTTTCTTAAGTGACTATCAAGGGATGATTGGAATTGACAATCATATTAAACAAATACAATCACTGTTGCGCGTTGGGTCCGGGGATGTTCGAATTGTTGGAATTTGGGGTATGGGAGGAATAGGCAAAACAACAATTGCTAGTGCAATATATCATAAACTGGCAACTCAATTCAGTTCCAGCAGCATCATCCTAAATGTTCAGCAAGAAATAGAGAGATTTGGACTACAACATATACAAAGAAAATATGTATCAAGGCTTCGAGGGGAAAACAACACATCCTCTAGACTAAGTTTTTCATATGATCCAAGGTTCAAATGGACAAAGTCTCTCCTTGTTCTTGATGATATGAACAATTCGGATCAACTTACAGATTTAATTGGAATGCGTAGTAACTTTGAGCCGGGTAGTAGAATCATTGTGACTAGTAGAGACATGCAGGTACTGAAGAATGTCAATGCTGATGAAATATATGAAGTTAAGGAGATGAATTTTCATGAATCACTACAACTCTTCTGTTTAAATGCCTTTAAACAAAACTATCCCCTAGAAGATTATGCTGGCTTAACAGAGAAGATTTTATATTATGCCAAAGGGGTTCCGTTAGCTCTCAAAGTTTTGGGTTTTTTGCTTTGCGGTAGAACAAAGGAAGCATGGGAAAGTCAATTAAAAAAGCTGGATAAGCTTCCCGAGAATGACATTTTCAAAGTGTTGAAATTAAGTTATAAATGTCTCGACGAAGAACAAAAGGATATATTTCTTGACATAGCTTGTTTCTATATAGGACATTTGGAAAGTATTGTTGTACAAACACTGAATAGCTGTGGTTTCTCTACCCACATTGGAATGGAGGTTCTCAAAGACAGGGGCCTTATATCTATATCAGAAGGTAGAGTTGTGATGCATGATCTAATACAAGAAATGGGACGTGAAATTGTCCGTCAACAATGTGTCCATAGTCCTGAAAAACGCAGTCGATTATGGAAGCATGAAGAAATTTATGAACTTTTAACAAACAAAAAGGGGACAGATGCAATCCATTGTATATTCCTGGACCTATGCAATATAGAAAAGGTTCAACTACATGCTAAAACTTTCAAAAAGATGCATAATCTTAGAATGATGGTGTTCTATAAGCCTTATGGCTTTTCGAAAGGCTCAAATGTGATCCTTCCTAAACTTTTTAATAACGGCTTCCCTCAAAAATCTTCGCCTGAAGACTTTCGCCCCAAAAATCTCGTTAAACTTTATATGCCCCATAGCCATCTTGAGCAACTTTGGCGGAGAGATAAGGATTTACCAAATTTGAAAACACTTGACCTTCGTGGTTCTCAGAACCTGATTCAAATACCAGACCTCGCTCAATGCCCAAATATTGAAGAAGTAATTCTTAGTCATTGCACAAATTTGGTTCAAGTTTACTCTTCTAGTTTCCTATCTAAGCTCAAATGTTTATGGTTAAATGGTTGTATAAGCCTTACGAGTCTACACATTCATAGCAATATTCTCCAGACAACTTCTGGATTAATAGTGCTCCATGGTTGTCACAATCTTGAGATGTTTTCAATCAGTAATGCAAAAATGGGGGTTCAAATACATGGTTGTTCGATCAGCATGTTCAGAAACATTTTTCCTGTGGCAAAACAAAGAGACAAGCTACCAATGTACCTTTCTAACTGCTCAAATATTTTTGATCCCCAAGAAGTTGTGTTTAATAAAGCAGCAAAGCAATTCTCGGGTACTTTTGACCCCCTGGATTATGCTGAGTTAAACAAAAATCCAAAGGATAATATACAATTACTAAACTTAGAAGTGTTGAGAGAAGGTTCACCCTCATTTTTTCCAAGTCTCAATGAGCTTTGTTGGTTGGATCTCTCTTACTGTGAGTCCCTCTTTAGCCTTCCAATTGACCTTTTTAAGTTGAAATTTCTAAGAAGACTTTACCTAAGTTGTTGCTTGAATTTGGAGAAGTTCCCCGAAATCGAGGAGACTGTAGAAAGTTTGATGGTGCTCATGTTAGACAAAACAGCAATAAAGAAACTACCTTCATCATTGCACCGTTTGGTCAACCTTGAAGAATTGAGCTTGTTCAATTGCCAGAAGCTTGAGACTATTCCATCTTCCATTGGAAGTCTAAGCAAACTCAGCAAGTTAAACCTTACCTGTTGTGAATCACTTGAAACTTTTCCAAGCACCATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGTTGCTCAATGTTGAAAACCTTCCCAGATGTCTTGGTGCCTGCGGAAACTTTTGTTCATATTAACTTAACAAAAACAGCAATTAAGGAACTGCCTTCATCTGTGGAGTATTTGGTTGCGCTTCAGACCTTGTGCCTGAAGTTATGCACTGAGCTGGTGTCACTTCCAAACAGCATTGTTAATCTAAACTATCTCTCTGAGCTTGATTGTTCTGGCTGTTGCAGTTTAACAGAAATCCCAAATAGCATCGGTAGTTTGTCATCATTGAGGGAACTTTCACTTCAAGATAGCAATATTGTGAACCTTCCTGAGAGCATAGCTCATCTCTCAAATTTAAAATCACTTGATTTAAGTGATTGCAAAAGGCTTGAATGTATCCCACAGCTTCCGCCATCTCTAAACCAGTTGTTGGCGTATGATTGCCCGATCATTGGAAGAATGGTACCAAATTCAAGGTTGGAACTCCCATCAATTTCCGACAAGGATACCTTCAAATTTCATTTCACCAATAGTCAAGAACTGGATGAAACTGCTTGCAGTAATATTGGGGCTGAAGCGTGGCTTAGGATGACCGAGGATGCATATAAGTCCGTCTTCTGTTTTCCTGGGAGTGCAGTTCCTCACTGGTTCCCTTACCGTTGTATGGGACGTTTGGTAACCATGAAGAAATATTATCTAGATTTGCTTAGTAATAATAGGATTGTTGGTTTTGCTCTGTGTGTCACTTTGGGGCATGAGGATATCACTTTGGGACATGAGGATATAGATGGTAGAATAGCAAGTCGCAGTAGCTTTACATACAGATTAACATTTGAATCTGATGATCACACTCACATTCTCCCTAACTGTGACAAGATAAAATACCATTTCTATTCGAAGGGTCGAAGTAGGTTAGTTGTCCAAGATCACACATTGATATGGAAATATTACTTGGACTTTTCTAGCTTTGACAACAGTCTTTTTGATGCCCACAACTTCACTTTTGAGTTCAGCGAAGATGGTTATCTTCCAAATTCAAGGGTCATTGTGAAAGAGTGTGGAATATGTCCTCTATATACAAAAGAAAAGGATGATAATTTTTGCAATGCTCCATGA 3828 0.3814 MCSFSFRGEDTRDNFISHLYAELCRKHIETFIDYKLGRGDEISPALYKAIDESMIYVVVLSENYASSTWCLDELTHILQCKEKYSGRHVIPVFYKVDPSDVRHQRQSYAEALVKHQRRFKDDQVNAWKAALTQVAGLSGWDSQVTRPEHTLIEDIVKDILRKLNLNRSFLSDYQGMIGIDNHIKQIQSLLRVGSGDVRIVGIWGMGGIGKTTIASAIYHKLATQFSSSSIILNVQQEIERFGLQHIQRKYVSRLRGENNTSSRLSFSYDPRFKWTKSLLVLDDMNNSDQLTDLIGMRSNFEPGSRIIVTSRDMQVLKNVNADEIYEVKEMNFHESLQLFCLNAFKQNYPLEDYAGLTEKILYYAKGVPLALKVLGFLLCGRTKEAWESQLKKLDKLPENDIFKVLKLSYKCLDEEQKDIFLDIACFYIGHLESIVVQTLNSCGFSTHIGMEVLKDRGLISISEGRVVMHDLIQEMGREIVRQQCVHSPEKRSRLWKHEEIYELLTNKKGTDAIHCIFLDLCNIEKVQLHAKTFKKMHNLRMMVFYKPYGFSKGSNVILPKLFNNGFPQKSSPEDFRPKNLVKLYMPHSHLEQLWRRDKDLPNLKTLDLRGSQNLIQIPDLAQCPNIEEVILSHCTNLVQVYSSSFLSKLKCLWLNGCISLTSLHIHSNILQTTSGLIVLHGCHNLEMFSISNAKMGVQIHGCSISMFRNIFPVAKQRDKLPMYLSNCSNIFDPQEVVFNKAAKQFSGTFDPLDYAELNKNPKDNIQLLNLEVLREGSPSFFPSLNELCWLDLSYCESLFSLPIDLFKLKFLRRLYLSCCLNLEKFPEIEETVESLMVLMLDKTAIKKLPSSLHRLVNLEELSLFNCQKLETIPSSIGSLSKLSKLNLTCCESLETFPSTIFKLKLTKLDLHGCSMLKTFPDVLVPAETFVHINLTKTAIKELPSSVEYLVALQTLCLKLCTELVSLPNSIVNLNYLSELDCSGCCSLTEIPNSIGSLSSLRELSLQDSNIVNLPESIAHLSNLKSLDLSDCKRLECIPQLPPSLNQLLAYDCPIIGRMVPNSRLELPSISDKDTFKFHFTNSQELDETACSNIGAEAWLRMTEDAYKSVFCFPGSAVPHWFPYRCMGRLVTMKKYYLDLLSNNRIVGFALCVTLGHEDITLGHEDIDGRIASRSSFTYRLTFESDDHTHILPNCDKIKYHFYSKGRSRLVVQDHTLIWKYYLDFSSFDNSLFDAHNFTFEFSEDGYLPNSRVIVKECGICPLYTKEKDDNFCNAP* 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0354 1275 CDD ABC_ATPase 190 329 - -
Mal5g0354 1275 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 854 1184 - -
Mal5g0354 1275 Gene3D - 161 327 IPR027417 -
Mal5g0354 1275 SUPERFAMILY L domain-like 777 1079 - -
Mal5g0354 1275 Gene3D - 4 160 IPR035897 -
Mal5g0354 1275 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 730 - -
Mal5g0354 1275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 423 IPR027417 -
Mal5g0354 1275 ProSiteProfiles TIR domain profile. 1 163 IPR000157 GO:0007165
Mal5g0354 1275 Pfam TIR domain 4 175 IPR000157 GO:0007165
Mal5g0354 1275 Gene3D - 330 413 IPR042197 -
Mal5g0354 1275 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 730 IPR044974 GO:0006952
Mal5g0354 1275 Pfam C-JID domain 1112 1266 IPR045344 -
Mal5g0354 1275 PRINTS Disease resistance protein signature 199 214 - -
Mal5g0354 1275 PRINTS Disease resistance protein signature 271 285 - -
Mal5g0354 1275 PRINTS Disease resistance protein signature 364 378 - -
Mal5g0354 1275 PRINTS Disease resistance protein signature 598 614 - -
Mal5g0354 1275 SMART till_3 4 137 IPR000157 GO:0007165
Mal5g0354 1275 Gene3D Ribonuclease Inhibitor 507 704 IPR032675 -
Mal5g0354 1275 Gene3D Ribonuclease Inhibitor 928 1096 IPR032675 -
Mal5g0354 1275 Gene3D Ribonuclease Inhibitor 752 927 IPR032675 -
Mal5g0354 1275 Pfam NB-ARC domain 181 397 IPR002182 GO:0043531
Mal5g0354 1275 Pfam Leucine Rich Repeat 579 596 IPR011713 -
Mal5g0354 1275 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 765 870 IPR044974 GO:0006952
Mal5g0354 1275 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 854 1184 IPR044974 GO:0006952
Mal5g0354 1275 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 140 IPR035897 -
Mal5g0354 1275 SUPERFAMILY L domain-like 467 696 - -
Mal5g0354 1275 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 765 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0354 Mal-Chr5 5549473 5554453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0354 783 969 WRKY Transcription Factor Family AT4G12020 37.173 3.91e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0354 - - ccaj:109803335 1359.36