Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0305 ATGCATAATATTGCACTTTATAATATGGATAAACTCATATTCAACTCTTGCATTGCATACTTTCTCATTTTCTCTCTCTTTGTGCATGGCAAAGACTTATCATGCAATCAAACCCCATACCCTCATGTGTGCAACCATTATATTGGAACTACCAATACACTATCAGCCCTAGATTCTTCCTCTTTCCATAATATGGCTCTTAAAGTCACCATGGACCAAGCTATTGAAGCACATAAACTTGTATCAACCATGAAATTAAATAATTTCAAAGACATGAGAGCCATGTCAGCATGGGAAGATTGTTTAGAGCTTTATGAGGATACAATTTATCAACTCAAACGCTCAATAAACTCAAACAATCTAAATGACAAATTAACTTGGCAAAGTGCTTCCATTACCAATCATCAAACTTGTCAAAATGGTTTCATTGATTTCAACCTTCCCTCTCACTTAAACTATTTCCCATCCATGTTAAGTAACTTCACTAAATTGCTAAGCAATTCTTTATCCATTAGCAACACTCTAGCTTCATCATATTCGTCCTCGTCCTCGTCCTCATCATCATCATCATCATCAAGTACTAAACAAAATGGAGGGAGAAAGTTGCTATCAAATGGATTTCCGTATTGGCTTTCAGGTTCAGATAGAAAGCTGCTTCAGGCAACACCAGGGTCAGGGCAAGCACCAAGAGCTGATATCGTGGTTGCACAAGATGGAAGTGGAAACTATAAGACAATCTCAGAGGGTGTTGTTGCAGCGGCTAAGCTTAGTGGGAAAGGAAGAGTTGTGATTCATGTGAAAGCAGGTGTTTATAGAGAGAATGTTGATATCAAGAAGACAATAAAGAATTTAATGATATTTGGAGATGGAATGGATTCTACTATTGTTACAAGCAATCATAACGCTATAGATGGTTCTACTACTTTCCGTTCAGCTACTTTTGCTGTTATGGGAGATGGTTTCATAGCAAAGGACATGACCTTTGAGAACACAGCAGGACCTCAAAAACACCAAGCAGTTGCTCTCCGTTCTGGTGCCGACCACTCTGTTTTTTACCGTTGCGCCTTCAAAGGCTACCAAGACACCTTATACGTTTATGCCAACCGTCAATTTTACCGTGACTGTAACATCTACGGAACAATCGATTTCATCTTCGGTAACGCTGTTACCGTCCTTCAAAACTGCAACATCTTTGTCAGAAAACCAATGAGCAACCAACAGAACACCGTAACAGCACAGGGAAGAACAGATCCAAATGAAAACACAGGAATTGTAATTCATAACTGTCGCATAACCGCCGCAGCTGATTTGAAACCGGTTCAAAATTCAGTTAAAACATATCTTGGTAGACCATGGCAGAAATATTCAAGAACTGTTGTTATGAAAAGTAATCTTGATGGTTTGATTAATTCTCAAGGTTGGGCTCCGTGGATGGGTGGATTTGCTTTGAATACACTTTACTATGGTGAATATATGAATGTTGGTGCTGGTGCTAATACTGGAGGGAGAGTTAAATGGCCAGGATTTCATGTTATTACCAATCCATCTGAGGCTGTTAAATTTTCAGTTGGTAATTTCTTAGCTGGTGATTCTTGGATTTCTGGTAGTGGTGTGCCGTTTGATGCAGGGTTGTGA 1635 0.3914 MHNIALYNMDKLIFNSCIAYFLIFSLFVHGKDLSCNQTPYPHVCNHYIGTTNTLSALDSSSFHNMALKVTMDQAIEAHKLVSTMKLNNFKDMRAMSAWEDCLELYEDTIYQLKRSINSNNLNDKLTWQSASITNHQTCQNGFIDFNLPSHLNYFPSMLSNFTKLLSNSLSISNTLASSYSSSSSSSSSSSSSSTKQNGGRKLLSNGFPYWLSGSDRKLLQATPGSGQAPRADIVVAQDGSGNYKTISEGVVAAAKLSGKGRVVIHVKAGVYRENVDIKKTIKNLMIFGDGMDSTIVTSNHNAIDGSTTFRSATFAVMGDGFIAKDMTFENTAGPQKHQAVALRSGADHSVFYRCAFKGYQDTLYVYANRQFYRDCNIYGTIDFIFGNAVTVLQNCNIFVRKPMSNQQNTVTAQGRTDPNENTGIVIHNCRITAAADLKPVQNSVKTYLGRPWQKYSRTVVMKSNLDGLINSQGWAPWMGGFALNTLYYGEYMNVGAGANTGGRVKWPGFHVITNPSEAVKFSVGNFLAGDSWISGSGVPFDAGL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0305 544 MobiDBLite consensus disorder prediction 178 200 - -
Mal5g0305 544 PANTHER PECTINESTERASE 24 543 - -
Mal5g0305 544 Gene3D - 227 544 IPR012334 -
Mal5g0305 544 ProSitePatterns Pectinesterase signature 1. 258 277 IPR018040 -
Mal5g0305 544 Pfam Plant invertase/pectin methylesterase inhibitor 34 171 IPR006501 GO:0004857
Mal5g0305 544 Pfam Pectinesterase 232 530 IPR000070 GO:0030599|GO:0042545
Mal5g0305 544 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 177 IPR035513 -
Mal5g0305 544 SUPERFAMILY Pectin lyase-like 226 543 IPR011050 -
Mal5g0305 544 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 175 IPR035513 -
Mal5g0305 544 TIGRFAM PME_inhib: pectinesterase inhibitor domain 34 175 IPR006501 GO:0004857
Mal5g0305 544 SMART PMEI_2 23 171 IPR006501 GO:0004857
Mal5g0305 544 ProSitePatterns Pectinesterase signature 2. 377 386 IPR033131 -
Mal5g0305 544 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 24 543 - -
Mal5g0305 544 CDD PMEI-like_3 33 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0305 Mal-Chr5 5003780 5006297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0305 34 544 Carbohydrate Esterase AT1G23200 53.861 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0305 - - gmx:100775898 827.78