Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0301 ATGGCTGCTAAACGGTTTTTAGATGATTTTAATCAAGACAAAGACAAACCAAATGACAAACGCATGAGAACTGCAACACCACCTTCTTTTGCTTCGGTAATAGGAGAAGTGGTTATGGTGAAAAACATGCAAAACCTTTTCTCTGGCTTGGAACCTTTACTTAGAAGAGTGGTGAATGAAGAGGTGGAACGAGCAATGAGACAATGTTATCCACCACGATCAATAACAAATTCACCTTCATTGAGACTTAAAGCAATGGAACAACCATTAAGTTTTCAATTCATGTTCAATAAGAAGCTTTCACTACCAATATTCACAGGTAGTAGAATACTAGACATGGATGGAAACTCAATCAATGTGATACTTGTTGACAAAAGCAATGACCAAATTGTCCCTACAAGTCTACCACAACCAATCAAGATAGAAATTGTAGTTCTTGATGGAGATTTTCCACCTAGTGAAAAGGAATCATCATGGACTAGTGAAGAATTCAATAACAATATTGTGAAAGAGAGAACTGGGAAGAGGCCATTGCTTACTGGAGAATTGAATCTTACTATGAGAGATGGAATTGCACCAATTGGGGATATTGAGTTCACTGATAATTCTAGCTGGATACGTAGTAGAAAGTTTAGAGTTGCTGTTAGAATTGCTCCTGGGACTAATCAAGGTGTCCGAATTCGTGAAGGCATGACCGAACCTTTTGTTGTTAAGGATCACCGTGGCGAATTGTACAAGAAACACCATCCACCAAATCTAAAGGATGAAGTTTGGCGTCTAGAGAAAATTGGGAAAGACGGAGCTTTCCATAAAAAGTTGACCTCAGAAGGGATTACCACAGTTCAAGAGTTTCTCAAATTGTCCGTAGTTAATCCTCATAGGCTCAGAAAGATTTTAGGCGTTGGTATGTCAGATAAAATGTGGGATGTAACAATTAAACATGCAAAGACTTGTGTAATGGGAAACAAACTCTATGTCTACCGTGGGTCTCAATTTACCATCCATGTGAATGCCATATGCCAAATGGTTAGAGCTTATATCAATGGCCAAGTCATTTCCAACCGAGACATTAGCAACATCAACAAGAGTTACATACAAAAGTATGTGAGAGAAGCATATGCTAGATGGAATGAGTTGGAGGAAATTGATGAAGTTTTGAACGACAATGTTGCTTTGTTAACTCAAGGTGAAACCTTGGAGCAATTTCCAAACAATAATCATCAAGCACCAGCTATAACATATGATCAAAACAACTATTTTAGTGATAAATCTCTAGAGACTGGCAACTACGTAGCAAACAATAATAATGCACAAATAGGTTGCATGGAGTGGTCACAATTTCCCACATCACCATTCATGAATGGCATACCTTACAACTTCTCAGATTCACAATCAGACGGTGGTGATATAACGCCTTCAAGTTCAGGACCAGTCATTGATGGAGCTTCAAGGTGGCATTAG 1461 0.3847 MAAKRFLDDFNQDKDKPNDKRMRTATPPSFASVIGEVVMVKNMQNLFSGLEPLLRRVVNEEVERAMRQCYPPRSITNSPSLRLKAMEQPLSFQFMFNKKLSLPIFTGSRILDMDGNSINVILVDKSNDQIVPTSLPQPIKIEIVVLDGDFPPSEKESSWTSEEFNNNIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRIAPGTNQGVRIREGMTEPFVVKDHRGELYKKHHPPNLKDEVWRLEKIGKDGAFHKKLTSEGITTVQEFLKLSVVNPHRLRKILGVGMSDKMWDVTIKHAKTCVMGNKLYVYRGSQFTIHVNAICQMVRAYINGQVISNRDISNINKSYIQKYVREAYARWNELEEIDEVLNDNVALLTQGETLEQFPNNNHQAPAITYDQNNYFSDKSLETGNYVANNNNAQIGCMEWSQFPTSPFMNGIPYNFSDSQSDGGDITPSSSGPVIDGASRWH* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0301 486 MobiDBLite consensus disorder prediction 458 486 - -
Mal5g0301 486 MobiDBLite consensus disorder prediction 1 26 - -
Mal5g0301 486 Pfam Calmodulin binding protein central domain 253 318 IPR046830 -
Mal5g0301 486 Pfam Calmodulin binding protein C-terminal domain 323 382 IPR046829 -
Mal5g0301 486 PANTHER PROTEIN, PUTATIVE-RELATED 1 477 - -
Mal5g0301 486 Pfam Calmodulin binding protein-like N-terminal domain 92 240 IPR046831 -
Mal5g0301 486 MobiDBLite consensus disorder prediction 1 22 - -
Mal5g0301 486 MobiDBLite consensus disorder prediction 458 478 - -
Mal5g0301 486 PANTHER OS02G0177800 PROTEIN 1 477 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0301 Mal-Chr5 4935078 4951047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0301 3 383 Calmodulin-binding Proteins AT5G57580 48.446 4.48e-119 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0301 - - gmx:100802257 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0301 5 4935078 4951047 Mal5g0301 5 4935078 4951047 ECH