Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0300 ATGGCTGCGAAACGGTTTTTCATTGATTCGGTTCAAGACAAAGACAAACCAAATGACAAACGCATGAGAACTACAACAACACCTTCTTTTGCTTCGGTAATAGGAGAAGTGGTTATGGTGAAAAACATGCAAAGCCTTTTCTCTGGTTTGGAACCTTTACTTAGAAGAGTAGTGAATGAAGAGGTGGAACGAGCAATGAAACAATATTATCCACTGCGATCAATAACAAAGATGCCTTCATTGAGACTTCAAGCAATGGAACAACCATTAAGTTTTCAATTCATGTTCAATAAGAAGCTTTCACTACCAATATTCACAGGTAGTAGAATACTAGACATGGATGGAAACTCAATCAATGTGATACTTGTTGACAAAAGCAATGACCAAATTGTCCCTACAAGTCTACCACAACCAATCAAGATAGAAATTGTAGTTCTTGATGGAGATTTTCCACCTAGTGAAAAGGAATCATCATGGACTAGTGAAGAATTCAATAACAATATTGTGAAAGAGAGAACTGGGAAGAGGCCATTGCTTACTGGAGAATTGAATCTTACTATGAGAGATGGAATTGCACCAATTGGGGATATTGAGTTCACTGATAATTCTAGCTGGATACGTAGTAGAAAGTTTAGAGTTGCTGTTAGAATTGCTCCTGGGACTAATCAAGGTGTCCGAATTCGTGAAGGCATGACCGAACCTTTTGTTGTTAAGGATCACCGTGGCGAATTGTACAAGAAACACCACCCACCAAATCTAGAGGACGAAGTTTGGCGTCTAGAGAAAATTGGGAAAGATGGAGCTTTCCACAAAAAATTGACCTCAAAAGGGATTACCACAGTGCAAGAGTTTCTCAAGTTATCCGTTGCTGATCCTCATAAACTCAGAAAGATTTTAGGTGTTGGTATGTCAGAGAAAATGTGGGATGTGACAATTAAGCATGCAAAGACTTGTGTAATGGGAAACAAACTCTATGTCTACCGTGGACCTCAATTTACCATCTATCTAAATGCCATATGCCAAATGGTCAGAGCTTACATCAATGGCCAAACCATTCCCAACCGAGACATTAGCAACATAAACAAGAGCTACATACAAAGTTATGTGAGAGAAGCATATGCTAGATGGAATGAGTTGGAGGAAATTGATGAAATTTTGAATGACAACGTTGCTTTGTTAACTCAAGGTGAAACCGTGGAGCAATTTCAAAACAATAATCATCAAGCATCGGTTATAACGTATGAACAAAACGACTATTTTGGTGATAAATCTCTAGAGACTAGCAACTATGTAGCAAGCCACAATAATCATCATGCACAGATAGGTTGCATCGAGTGGTCACCATTTCCCACGTCACCATTCATGAACGGCATACCTTATAGCTTCTCAGATTCACAATCCGACGGTGGTGATGTAACACCTTCAAGTTCAGGACCAATCATTGATGGAGCTTCAAGGTGGCATTAG 1467 0.3926 MAAKRFFIDSVQDKDKPNDKRMRTTTTPSFASVIGEVVMVKNMQSLFSGLEPLLRRVVNEEVERAMKQYYPLRSITKMPSLRLQAMEQPLSFQFMFNKKLSLPIFTGSRILDMDGNSINVILVDKSNDQIVPTSLPQPIKIEIVVLDGDFPPSEKESSWTSEEFNNNIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRIAPGTNQGVRIREGMTEPFVVKDHRGELYKKHHPPNLEDEVWRLEKIGKDGAFHKKLTSKGITTVQEFLKLSVADPHKLRKILGVGMSEKMWDVTIKHAKTCVMGNKLYVYRGPQFTIYLNAICQMVRAYINGQTIPNRDISNINKSYIQSYVREAYARWNELEEIDEILNDNVALLTQGETVEQFQNNNHQASVITYEQNDYFGDKSLETSNYVASHNNHHAQIGCIEWSPFPTSPFMNGIPYSFSDSQSDGGDVTPSSSGPIIDGASRWH* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0300 488 MobiDBLite consensus disorder prediction 463 488 - -
Mal5g0300 488 Pfam Calmodulin binding protein C-terminal domain 323 382 IPR046829 -
Mal5g0300 488 Pfam Calmodulin binding protein-like N-terminal domain 92 240 IPR046831 -
Mal5g0300 488 PANTHER PROTEIN, PUTATIVE-RELATED 1 479 - -
Mal5g0300 488 MobiDBLite consensus disorder prediction 463 480 - -
Mal5g0300 488 PANTHER OS02G0177800 PROTEIN 1 479 IPR012416 GO:0005516
Mal5g0300 488 Pfam Calmodulin binding protein central domain 253 318 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0300 Mal-Chr5 4916792 4920377 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0300 13 383 Calmodulin-binding Proteins AT5G57580 47.872 2.59e-116 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0300 - - gmx:100802257 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0300 5 4916792 4920377 Mal5g0300 5 4916792 4920377 ECH