Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0280 ATGGCTGGCTTCGGCGCTAATAATCCTTTTGATGAATTTATGTCTGGAAAAAATATTCAGGTGGCTATGCAAGGGACACATATCTCACAATGGGATTTGAAGGGGAGAACTCCTGTCAAATATAATGAGATGATCGGGAGAACTCCTTCCTATTGGCATTTTCTCATGCCAACGGAGGATATTTGTAAGGATGGAGGTTTGTTGAAGAAGATACTCAAAACTGGTGAGGAGGAGGACAATTATCAAAACAACCACCTTGATGAGGATCATGATCATGTTTTAGTTAAGTATGAAGCACGTCTTGATGATGGAACTCTTGTTCAAAAATCTGATGGAGCGGAGTTCACACTGAAGGATGGTCATTTTTGTCCTGCATTGTCAATCGCTGTTAAGACCATGAAAGTTGGAGAGAAAGTCAGTTTGACTGTCAAGCCACAATATGGATTTGGTGACAAGGGCAAGCCAGCTCACTGTGATGAAGGTTCAGTTCCGCCTAATGCAACATTGCACATTACTCTCGAGTTTGTTTCTTGGAAGAAAGCACCTTTTCATAAGAAGGTCCTCAAGGAAGGAGAAGGAGACGACTGTCCAAATGAGGGTGCTCTTGTCAAATTGAAACTAATTGGTAAGCTGCAAGACAGCACTGTATTTTTTAAGAAGGGATATAGTGATGTTGATGGTGATGAAGCGGAGCTGTTTGAATTTAAAACAGACGAGGATCAAGTGATTGATGGGCTTGATAGGGCTGTAATGAGCATGAAGAAGGGTGAGGTAGCTTTGCTGACTATTCCGCCTCAATATGCTTTTGGTTCATCAGAGTCTCGGCAAGAATTGGCAGTGGTTCCTCCTTATTCAACCTTGTACTATGAGGTTGAGCTAGTATCATTTGTAAAGGCTAAAGAGGCATGGGACATGAACACTAAAGAGAAGATGGAAGCTGCTCTTAAGAAGAAAGAAGAAGGCCTAGCATTATTTCGTGCTAATGAATGTGCAAGAGCTTCTAAAAAGTTTCAGAAGGCTGTAAAGTTCGTAGAGGATGATACTTCCTTTAGTAACGAGGAGATGAAAATTGTTGCTGGCTTGAAGTTTTCATGTGATATGCTCAGTGCAACATGCATGATGAAATTGAAAGATTATGAACAACAAAAGGAAATTAATAAGTTGCTCGAGTTAAAGCGCACAGACCCTAAAAGGTGGGCTGTGGAGCGCAAAGGGATCAGCTGGATGGATTACGCAGAGGGATCATCTGGATGGATTACGCTGAGGGCCTACTATTGA 1278 0.4178 MAGFGANNPFDEFMSGKNIQVAMQGTHISQWDLKGRTPVKYNEMIGRTPSYWHFLMPTEDICKDGGLLKKILKTGEEEDNYQNNHLDEDHDHVLVKYEARLDDGTLVQKSDGAEFTLKDGHFCPALSIAVKTMKVGEKVSLTVKPQYGFGDKGKPAHCDEGSVPPNATLHITLEFVSWKKAPFHKKVLKEGEGDDCPNEGALVKLKLIGKLQDSTVFFKKGYSDVDGDEAELFEFKTDEDQVIDGLDRAVMSMKKGEVALLTIPPQYAFGSSESRQELAVVPPYSTLYYEVELVSFVKAKEAWDMNTKEKMEAALKKKEEGLALFRANECARASKKFQKAVKFVEDDTSFSNEEMKIVAGLKFSCDMLSATCMMKLKDYEQQKEINKLLELKRTDPKRWAVERKGISWMDYAEGSSGWITLRAYY* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0280 425 Gene3D Tetratricopeptide repeat domain 302 414 IPR011990 GO:0005515
Mal5g0280 425 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 89 174 IPR001179 GO:0003755
Mal5g0280 425 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 197 294 IPR001179 GO:0003755
Mal5g0280 425 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 183 298 - -
Mal5g0280 425 Gene3D - 57 179 IPR046357 GO:0003755
Mal5g0280 425 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 200 297 IPR001179 GO:0003755
Mal5g0280 425 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 297 397 - -
Mal5g0280 425 PANTHER PEPTIDYLPROLYL ISOMERASE 59 181 - -
Mal5g0280 425 SUPERFAMILY FKBP-like 184 316 - -
Mal5g0280 425 SUPERFAMILY FKBP-like 59 182 - -
Mal5g0280 425 Gene3D - 180 301 IPR046357 GO:0003755
Mal5g0280 425 Coils Coil 308 328 - -
Mal5g0280 425 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 90 179 IPR001179 GO:0003755
Mal5g0280 425 PANTHER PEPTIDYLPROLYL ISOMERASE 183 298 - -
Mal5g0280 425 PANTHER PEPTIDYLPROLYL ISOMERASE 297 397 - -
Mal5g0280 425 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 59 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0280 Mal-Chr5 4614284 4617902 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0280 60 413 Calmodulin-binding Proteins AT3G25230 61.326 8.91e-143 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0280 K09571 - gmx:100803189 432.565