Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0260 ATGGATGAGGATCAAGAGATGGAGAATTTCGGAACGGACAAAGATTACGAAGGTGGTCAATGGGTTAATGGTGAATTCTACTATCGAAAGCGCCGAGAGAATCAACGAACTCAAACCAAAGATGATGTTCTCTATGGAGTTTTTGCAGATTCTGAAGATGATGATGATGATGAGTATTCTAGTAAGAAGCGAAGAAAAGACCGCGATTTTGGGAGGAAACAGGATCTCACTAAACCGGTGAATTTCGTTTCAACTGGAAATTTTATGCCTAATCAGGATAATGTTGATGAGGATTTGAAAGAACAGGATGATGGTGAAGATAGGCCTGGTTTAGGGTTAGGTCTTGGTTTTGGGTCTGCTAGCATATCGGGGTCTGGTTTAGGTTTTAATTCTGGTCGTGGTGTTGCGAATGGTTCTGATAGGAATGATGAATCAGATGAGAATGATATTGGGGATGATAAGTTTTTGCCTACTGAGTTTGGGAGGAAGATTAAGGAGGGAGCGATGAGAAGGGAGAAGGAGAGATTGGAGAAGAAGAAGAAGGGGAAGAAGCAGGGGATGGGTTTAGGTCAGGAGGGATCGGTGGATGTTGGGAAATTTGAGAGTCATACGAAGGGAATTGGAATGAAGTTGCTTGAGAAGATGGGTTATAGAGGGGGTGGTCTTGGGAAGAATGAGCAGGGTATTTTGAATCCTATTGAGGCGAAATTGCGGGCTAAAAATTCTGGTCTTGGATTTAACGAATCGAAGGGGACCACAATGCCGTTGCCTGCTTTGCAGACGGCGAAGAAGAGTGAACCGGGAGGAGTTGTGCAGCCTACAGTTGGAAGAACACGTTCGTGGCTAAAGCAGCCTAAGAAGAAAAATAAAGAAGAGGAAAAGTATGTAACTGCTGAGGAGTTGTTGGCGAGCAAGCAAGAAGAAGATTCAGAGGTTGTTCAGAAGATTTATGATATGAGGGGGCCTCAGGTACGAGTCTACACAAATTTGTCTGATTTGAATGCTGAGGAGAAAGCCAAGGAAAAGGATGTCCCAATGCCTGAGCTTCAGCATAACGTAGCACTAATAGTTCGGTTGGCTGAGGCCGACATCCTAGAGATTGATAGAGATTTGAGGAAAGAGAAGGATATAGCACTTAGCTTGAAAAAAGAAAAAGAGAAGTTGGAAGCTGAGGCAGCGTTTCAAAAGAAGCAGTTGGATAATTATGAGAAAATAATGAGTGTGCTGGACCGAGTCGGGGAAGAGAACACCTTAGGAAAATTAACATTGGATTCCCTTGCTCAATGCTTTAGGGACATGCACAAAAGATATGCTGAGGACTATAAGTTGTGTAACTTGTCATGCATTGCTTGCTCATATGCTCTGCCTTTGTTTATCAGAATGTTCCAAGGATGGGATCCTCTTCGAAATCCATCTCATGGTTTGGAGTTGGTATCACAGTGGAAGGCATTGCTTGAAGGAGATGATTGTTTTGATATATGGGACATGTCATCACCTTATACTCACCTGGTTTCAGAGGTTGTATTGCCGGCTGTTAGAATATCTGGTATCAACACCTGGCATGCACGGGATCCTGAGCCGATGCTACGGTTTTTGGAGTCATGGGAAAAATTGCTTCCTTCTTCGGTTCTTTCTACTATATTAGACAACATAGTCATGCCGAAACTATCAAGTGCAGTAGGTACTTGGGAACCACATCTTGAGACCATTCCTATCCACACATGGGTACATCCATGGCTACCTCTGCTAGGGCACAAGTTGGAGGGTATCTACCAGACGATTCGTTTCAAATTGAGTACTGTTCTTGGTGCATGGCACCCAAGTGATGGTTCTGCATATGCTATACTGTCCCCTTGGAAGACTGTATTTGATTCTGATAGTTGGCAACAACTTATGCACCGTTTTATTGTACCAAAGCTGAAAGCTGTCTTGCAAGATGACTTCCAAGTGAACCCGGCAAGTCAGAATCTTGATCAATTTTATTGGGTAATGAACTGGGCTTCAGCTATTCCCATTCATCTGATGGTTGACACGATGGAGATCTTCTTTGCGAAGTGGCTAACAGTTTTGTACCGCTGGTTGTGCTCAAATCCTAACTTTGATGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAAGAACTTTTGGCAAATGAAAGTATTCGATACAAGCTCAATTGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTTGTGCAACCTGGTTTGAAGGAGAAGATAAGCTATATCAGGGTAAGTGAGCAAAGGAAATTTGAGACTCAGCAGAAAGCAGCAGCCTCTGCTCAACAACAGGCTGCTGCAAGCATGGGCGGTGCTGTCAACGCAGATGGTGTGAATGAAATGAGCGTGAAAGAACTCATTGAGGCCTATGCTCGGGATCATGGTTTACTGTTCAAACCTAAATCTGGTAGAATGCACAATGGTCATCAAATATACGGGTTTGGGAATGTCAGCATAATAATCGACTCTCTAAATCAAAAGGTCTATGCTCAAAATGAGGAAACATGGTCTTTAGAAACTCTTGAAAGATTGCTAGAGTTACATAATAAATTCCTTAGTAAAAGACGCTGA 2610 0.4291 MDEDQEMENFGTDKDYEGGQWVNGEFYYRKRRENQRTQTKDDVLYGVFADSEDDDDDEYSSKKRRKDRDFGRKQDLTKPVNFVSTGNFMPNQDNVDEDLKEQDDGEDRPGLGLGLGFGSASISGSGLGFNSGRGVANGSDRNDESDENDIGDDKFLPTEFGRKIKEGAMRREKERLEKKKKGKKQGMGLGQEGSVDVGKFESHTKGIGMKLLEKMGYRGGGLGKNEQGILNPIEAKLRAKNSGLGFNESKGTTMPLPALQTAKKSEPGGVVQPTVGRTRSWLKQPKKKNKEEEKYVTAEELLASKQEEDSEVVQKIYDMRGPQVRVYTNLSDLNAEEKAKEKDVPMPELQHNVALIVRLAEADILEIDRDLRKEKDIALSLKKEKEKLEAEAAFQKKQLDNYEKIMSVLDRVGEENTLGKLTLDSLAQCFRDMHKRYAEDYKLCNLSCIACSYALPLFIRMFQGWDPLRNPSHGLELVSQWKALLEGDDCFDIWDMSSPYTHLVSEVVLPAVRISGINTWHARDPEPMLRFLESWEKLLPSSVLSTILDNIVMPKLSSAVGTWEPHLETIPIHTWVHPWLPLLGHKLEGIYQTIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSDSWQQLMHRFIVPKLKAVLQDDFQVNPASQNLDQFYWVMNWASAIPIHLMVDTMEIFFAKWLTVLYRWLCSNPNFDEVTKWYLGWKELIPKELLANESIRYKLNCGLDMMNQAVEGMEVVQPGLKEKISYIRVSEQRKFETQQKAAASAQQQAAASMGGAVNADGVNEMSVKELIEAYARDHGLLFKPKSGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNEETWSLETLERLLELHNKFLSKRR* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0260 869 MobiDBLite consensus disorder prediction 151 186 - -
Mal5g0260 869 Pfam GC-rich sequence DNA-binding factor-like protein 423 690 IPR022783 -
Mal5g0260 869 ProSiteProfiles G-patch domain profile. 204 249 IPR000467 GO:0003676
Mal5g0260 869 Coils Coil 371 405 - -
Mal5g0260 869 MobiDBLite consensus disorder prediction 57 75 - -
Mal5g0260 869 MobiDBLite consensus disorder prediction 30 196 - -
Mal5g0260 869 PANTHER TUFTELIN-INTERACTING PROTEIN 11 9 857 - -
Mal5g0260 869 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 9 857 IPR045211 GO:0000390
Mal5g0260 869 PIRSF TFIP11 1 863 IPR024933 -
Mal5g0260 869 MobiDBLite consensus disorder prediction 123 138 - -
Mal5g0260 869 Pfam G-patch domain 204 245 IPR000467 GO:0003676
Mal5g0260 869 Coils Coil 288 308 - -
Mal5g0260 869 MobiDBLite consensus disorder prediction 78 92 - -
Mal5g0260 869 Pfam Tuftelin interacting protein N terminal 4 104 IPR022159 -
Mal5g0260 869 SMART G-patch_5 202 247 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0260 Mal-Chr5 4379384 4381993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0260 191 248 C2H2 Transcription Factor Family AT5G26610 43.103 2.75e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0260 K13103 - gmx:100781621 1289.25