Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0256 ATGTTTCATGTAAGGATTTTGGTGAAGATGGTTCTTGTTCTAAGTAGCTGGATTTTGAGTTCTCATGTTTTTGTTAGTTTCTTGTTGCTGATTAGTTGTGGAATAACCTATGGGACTGAAACTGATATCTTCTGTTTGAAAAGTATAAAAAATTCGATTCAAGACCCGAATAATTATTTGACATCTTCATGGAATTTCAACAATAAAACTGAAGGGTTTATATGTAGATTTAATGGTGTTGAATGTTGGCATCCTGATGAGAATAAAGTCTTGAATCTCAAATTATCAAATATGGGACTCAAGGGTCAGTTTCCTCGTGACATTATTAATTGTTCGAGCATGACAGGATTAGATCTTTCGATCAATGATCTATCCGGAACCATTCCGGAAGATATATCTAAGCTTCTTCAATTCGTGACATCACTTGATCTATCTTCAAATCAATTTTCTGGAGAGATACCTGTTAGTCTTGCAAATTGTACCTATCTAAATATCCTTAAACTTGATCAGAACCGACTCACTGGTCAAATTCCTCCGCTATTTGGCACTCTCGAACGTATTAAGACGTTTGATGTATCCAACAATCTTTTGACCGGGCCGGTTCCAAACTTCACTGTTGCTAAAGTTGATGTAAATTATGCAAATAATCAAGGTCTTTGTGGACCTAATTTGGGGACTTGCAAGATCCTGAATTCTTCGAAGAGTAACACTGCAGTTATAGCGGGAGCAGCTGTTGGTGCGGTGACTCTTGCAGTGATTGGATTGGGCGTTTTTATGTTCTTCTTTGTTCGCCGCGGTTCTTATAGGAGGAAAAAGGAAGAAGATCCTGAAGGAAATAAATGGGCAAGAAGTCTTAAAGGAACTAAAGCAATTAAGGTATCTCTATTTGAGAAATCAATTTCAAAAATGAAATTGAGCGATCTAATGAAGGCTACCAACAACTTCAGTAATATCAATATCATTGGGACAGGAAGAACAGGAACAGTTTACAAAGCTACCCTTGATGACGGCACGGCATTTATGGTGAAAAGATTGCAGGAATCTCAACACTCCGAGAAAGAATTTATGTCTGAGATGTCGACACTAGGGACTGTCAAACATCGTAATCTGGTTCCTCTTTTAGGTTTTTGTGTGGCCAAAAAGGAGAGGCTTTTGGTCTTTAAAAACATGCCGAATGGAATGCTCCATGATCAACTACATCCTGCTGATGGTGAGTGCACCCTCGACTGGCCTTCGAGACTCAAAATCGCAATTGGAGCAGCTAAAGGATTAGCATGGCTTCATCACAGCTGCAATCCTCGTATCATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGACGCAGATTTCGAGCCCAAAATTTCCGATTTCGGCCTCGCCAGATTGATGAACCCGCTTGATACACATTTAAGTACTTTTGTAAATGGGGAGTTTGGTGATTTTGGTTATGTGGCTCCTGAGTATACAAAAACCTTGGTTGCTACGCCTAAGGGCGATGTTTTTAGCTTCGGGACTGTGCTTCTTGAGTTAGTAACCGGTGAAAGACCTGCAAATGTGGCTAAAGCGCCGGAAACTTTTAAAGGAAATCTCGCAGAATGGATTGCGGAGCTTTCAAGCAACTCACAACTCCACGATGCCATTGACGAATCACTTCTAAACAAGGGCGATGATAATGAGCTTTTCCAATTTTTAAAGGTTGCATGCAACTGTGTTACACCAAATCCAAAGGAGAGGCCAACCATGTTTGAAGTATATCAGTTTTTAAGAGCTATTGGTGGTAGGTACAATTTCACAACTGAAGATGAAATATTGATACCTGTAGATATTGGTGATAGTAACATGGAGGAACTTATTGTTGCTAGAGAAGGAAATAATTGA 1881 0.3955 MFHVRILVKMVLVLSSWILSSHVFVSFLLLISCGITYGTETDIFCLKSIKNSIQDPNNYLTSSWNFNNKTEGFICRFNGVECWHPDENKVLNLKLSNMGLKGQFPRDIINCSSMTGLDLSINDLSGTIPEDISKLLQFVTSLDLSSNQFSGEIPVSLANCTYLNILKLDQNRLTGQIPPLFGTLERIKTFDVSNNLLTGPVPNFTVAKVDVNYANNQGLCGPNLGTCKILNSSKSNTAVIAGAAVGAVTLAVIGLGVFMFFFVRRGSYRRKKEEDPEGNKWARSLKGTKAIKVSLFEKSISKMKLSDLMKATNNFSNINIIGTGRTGTVYKATLDDGTAFMVKRLQESQHSEKEFMSEMSTLGTVKHRNLVPLLGFCVAKKERLLVFKNMPNGMLHDQLHPADGECTLDWPSRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPLDTHLSTFVNGEFGDFGYVAPEYTKTLVATPKGDVFSFGTVLLELVTGERPANVAKAPETFKGNLAEWIAELSSNSQLHDAIDESLLNKGDDNELFQFLKVACNCVTPNPKERPTMFEVYQFLRAIGGRYNFTTEDEILIPVDIGDSNMEELIVAREGNN* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0256 626 Pfam Protein tyrosine and serine/threonine kinase 318 589 IPR001245 GO:0004672|GO:0006468
Mal5g0256 626 SUPERFAMILY Protein kinase-like (PK-like) 293 589 IPR011009 -
Mal5g0256 626 CDD STKc_IRAK 321 589 - -
Mal5g0256 626 PANTHER RECEPTOR-LIKE PROTEIN 55 15 603 - -
Mal5g0256 626 ProSiteProfiles Protein kinase domain profile. 315 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0256 626 Gene3D Phosphorylase Kinase; domain 1 276 388 - -
Mal5g0256 626 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Mal5g0256 626 Gene3D Ribonuclease Inhibitor 40 228 IPR032675 -
Mal5g0256 626 SUPERFAMILY L domain-like 40 206 - -
Mal5g0256 626 Pfam Leucine rich repeat N-terminal domain 41 83 IPR013210 -
Mal5g0256 626 Gene3D Transferase(Phosphotransferase) domain 1 390 604 - -
Mal5g0256 626 PANTHER LRR RECEPTOR-LIKE KINASE 15 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0256 Mal-Chr5 4264424 4268388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0256 39 599 Receptor kinase-like Gene Family AT1G27190 45.936 1.88e-179 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Mal5g0256 PK_Tyr_Ser-Thr 2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0256 - - gmx:100817267 932.169