Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0228 ATGAATCACAGAAATACAAGGGCTAATCCATGTCCTTTGTGCCGATATATGAGAAGAAGACATGGTCCTACTTGTGAATTTGGCCAATTCTTTCCGGCCAATAGAAGTGAGGACTTTCTGAAAGCCATCAAACGTATTGGGTTAGGTAACCTAATGAGAATCATGCGAACAACAGAACCACATCAAAGGCAAGATGTGGCCAATTCTATCCTCGGAGAAGGGAGAGCTTGGCAAGTTTACCCTAATCAGGGGTTTGTTGGATACCATATGGATTTGGGTGTTCTAATAAATTCCTTTTTGAGTGAAACTGAAGCTGTTAATAGATTATCAACATTGTGTGTGGATAGTGAAAATCCAAACAATACACCATCTTCCATCTCTCCTATGAGTAACCAACTCTATAGTTTTAACATTCAAATCCCCAACATGGCTATAAGGACCCGTGGAGAGATCATTATGGACATCATGGAGTACTACTTTGCACAAGGTATTCCATGTATTCATGAGAAAGGAGAATCAAGTAAAGCATCCAAGAGAAGGAAACTTCATGAAGAAATGGGGATAAAGGATGATGAAAAGGGGAAAGGAATTCTTATTGAACAAGAGGACACTAGTGATGAGGAGGAAGACTAG 633 0.3981 MNHRNTRANPCPLCRYMRRRHGPTCEFGQFFPANRSEDFLKAIKRIGLGNLMRIMRTTEPHQRQDVANSILGEGRAWQVYPNQGFVGYHMDLGVLINSFLSETEAVNRLSTLCVDSENPNNTPSSISPMSNQLYSFNIQIPNMAIRTRGEIIMDIMEYYFAQGIPCIHEKGESSKASKRRKLHEEMGIKDDEKGKGILIEQEDTSDEEED* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0228 210 Pfam Lateral organ boundaries (LOB) domain 10 102 IPR004883 -
Mal5g0228 210 MobiDBLite consensus disorder prediction 171 201 - -
Mal5g0228 210 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Mal5g0228 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 175 - -
Mal5g0228 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25-LIKE 9 175 - -
Mal5g0228 210 MobiDBLite consensus disorder prediction 171 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0228 Mal-Chr5 3926125 3927060 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0228 5 87 AS2 family AT2G19820 36.905 7.02e-13 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal5g0228 LOB 1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0228 - - mtr:MTR_8g009730 181.8