Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0189 ATGGATGGTGACAAATCTCCCTCTTTGTTGGATGAAGACAAGTTTCAACTAGAGAATGTGCATCAACCAAGTTTCTCTTTTGAGAGTGACAATTCCCAATCATCAACCATACAATATTTTAATAATATTGTTGATAATGTTTGTGTCACCACCACAATTCAAGAGAACATGATTCTCAAGAGTAGTCATAGTTCCAACTCTCTCATTTCTCAAGAACATTATGATGCTATGAATTCACAACAATTAACACCTTCTCAATACATTTTGTCTTTTGAAAACTCAACTGTGGAACCTTCCCCTAATAGTGTCACATGTTCTTCTATTATGGTCCAAAAAACAACTTTGGATCATAACAATATTGTTAGTGAATTACCAAAGGTAACTAAGAAAAGAACCAAGAATTCTAGAAGCTCTTCTTCTGAGATACAAGATCACATTATGGCTGAGAGAAAAAGGAGACAAGTTATCACTGAGAGGTTCATAGCACTATCTGCCACCATACCCGGATTGAAGAAGACTGATAAGTCCTACATACTTCAAGAAGCTATCAATTATGTGAAACAACTTCAAGAAAGAGTAAAGGAGCTAGAGAATCATAACAAAAGGAAAAGAGATTCAGTAATATTCATCAAGAAATCCCAAGCTTGCACTATAGAGGAAAAAAATAATTCATGTGAAGAGAACTTTGATAGTGATGACCATAGATATTATTCCAAGAAGGAACTACCTAAGGTTGAAGCAAGAGTCATTGACAAGGAAATTCTAATTGGAATCCATTGTGAGAAACAAAAGGATATTGTGGTCAGATTAATGGCCTTGCTTCAAAATCTTCATCTATCTCTTGCTAGTAGCAGTGTATTGCCATTTGGAACTTCCACTCTAAAAGTTACAATCATTGCTCAGGAATGTATGATAAGATTTGGTGAGCTCAACATGTAA 939 0.3493 MDGDKSPSLLDEDKFQLENVHQPSFSFESDNSQSSTIQYFNNIVDNVCVTTTIQENMILKSSHSSNSLISQEHYDAMNSQQLTPSQYILSFENSTVEPSPNSVTCSSIMVQKTTLDHNNIVSELPKVTKKRTKNSRSSSSEIQDHIMAERKRRQVITERFIALSATIPGLKKTDKSYILQEAINYVKQLQERVKELENHNKRKRDSVIFIKKSQACTIEEKNNSCEENFDSDDHRYYSKKELPKVEARVIDKEILIGIHCEKQKDIVVRLMALLQNLHLSLASSSVLPFGTSTLKVTIIAQECMIRFGELNM* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0189 312 Coils Coil 179 206 - -
Mal5g0189 312 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 189 IPR011598 GO:0046983
Mal5g0189 312 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 301 - -
Mal5g0189 312 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 204 IPR036638 GO:0046983
Mal5g0189 312 Gene3D - 139 212 IPR036638 GO:0046983
Mal5g0189 312 SMART finulus 146 195 IPR011598 GO:0046983
Mal5g0189 312 PANTHER BHLH TRANSCRIPTION FACTOR 1 301 - -
Mal5g0189 312 Pfam Helix-loop-helix DNA-binding domain 144 190 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0189 Mal-Chr5 3348942 3352724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0189 126 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.902 5.53e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g0189 HLH 2.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0189 - - mtr:MTR_8g009020 441.425