Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0184 ATGGAAGAACCAAAAGAGAACTGGATTCCTCATTTGCAAATGGGGGATGACAATTTCTTCAATCATCAAAACCAGAGATTAAATTCTACATATTTGCATCAACAAATCTCCTACCCTTCTTCTACTCTTGTTGAGGCTACTTACAATACCACAAATTTTGAAACCCCTCTTCATGCACAAAACAACCCTACCAATATTAATATTAACAATCTTTTTATGGATGGTGATAGAACATGTAATTTTAACATGGTTGACACACATGAAGATGCTGCAGAAAACATTCTACCCTCCCACATTTTGCCTTTGATTAACTCACCACTTGACCCTGCTTTTCAAAGTGCACAAGTCAACCATGGCTTGAAGCCAATTAAGAGAAAGATTAGAAGCTCTTCTGAGACAGCAGATCACATAGCATCTGAGAGAAAAAGAAGACTAAAATTGACTAGGAACTTCATTGCACTTTCAGCTATAATTCCTGGCTTGAAGAAGACAGAAAAGTCTTATATACTTCAAGAAGCAATCAATTATGTGAATCAACTTCAAGAGCGTGTAATTGATCTAGAAATTCAGTATGAAAAGATAAATATTGCATACTCAACAATGGTCAAAAAGAAACTACATGACTCTACCACTTGTGAAGCAAACTTGGCTAGATTCAGTGATGAATTAGCACTACCTGAAGTCACAGCAAGAGTATCAGAAAAGAGTGTGATGATTGGTATCCAATGTGAAAAGAAGCAAAATGATATTGTGCACAAAATAGTGAGCTTGGTTACAAATCTTCATCTATCTATAACCAATACTAACATTTTCCCATTTGGTACTTCCACACTTCATATCACAATTATTGCTCAGATGAAGGACGAATATAGCATGACAATCAATGATCTGGTGAAAAACTTGAGGAAAGTATTGTTGGAGTCAAATGATGTAGAACAATAA 942 0.3535 MEEPKENWIPHLQMGDDNFFNHQNQRLNSTYLHQQISYPSSTLVEATYNTTNFETPLHAQNNPTNININNLFMDGDRTCNFNMVDTHEDAAENILPSHILPLINSPLDPAFQSAQVNHGLKPIKRKIRSSSETADHIASERKRRLKLTRNFIALSAIIPGLKKTEKSYILQEAINYVNQLQERVIDLEIQYEKINIAYSTMVKKKLHDSTTCEANLARFSDELALPEVTARVSEKSVMIGIQCEKKQNDIVHKIVSLVTNLHLSITNTNIFPFGTSTLHITIIAQMKDEYSMTINDLVKNLRKVLLESNDVEQ* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0184 313 Pfam Helix-loop-helix DNA-binding domain 136 181 IPR011598 GO:0046983
Mal5g0184 313 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 78 311 - -
Mal5g0184 313 Gene3D - 124 195 IPR036638 GO:0046983
Mal5g0184 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 196 IPR036638 GO:0046983
Mal5g0184 313 PANTHER BHLH TRANSCRIPTION FACTOR 78 311 - -
Mal5g0184 313 Coils Coil 170 197 - -
Mal5g0184 313 SMART finulus 137 186 IPR011598 GO:0046983
Mal5g0184 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 131 180 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0184 Mal-Chr5 3282606 3285356 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0184 101 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.654 2.35e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g0184 HLH 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0184 - - aprc:113850585 199.904