Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0180 ATGAACTGCTTTTCCTATTTCAAACACAAATACAAGGGTAGGGGTCAAAGATCAGCACCAGAACTAAAAGAACAAGAAAAACATCAGTTTTCGGGATCTGAAAGAGTTACCAAGTCTTCTTGTTCATCTACCTCTTCACCTAGGGGTATACCGAAACTTTATGAGGAAAAAGGTCATAATTTGAGGGTGTTTTCTTTCTCGGAGCTCAGCCGTGCAACAAGTGATTTCAGTAGGCTTCTTAAGATAGGTGAAGGTGGATTTGGAAGTGTGTTTAAAGGTTCAATTAAACCTGTTGATGGAAATGGTAATCCTATCTTAGTTGCCATCAAAAGGCTTAACAAAGATGCATTGCAGGGTCATAAGCAATGGTTGACTGAAGTACAGTTTCTTGGTGTTGTGGACCATCCAAACCTTGTCAAGCTTATTGGATACTGTGCTGTGGATGGCGAGAGAGGGATCCAAAGATTACTCGTGTACGAATACATGCCGAATCGAAGCTTAGAAGCTCATCTTTTCAACAAAGCTTATGATCCCGTTCCTTGGAAAACAAGACTTGAAATTGCACTTGGAGCAGCTCAAGGCCTATCTTATCTGCATGAAGAATTAGAAGTCCAGGTGATATATCGCGATTTTAAATGTTCAAATGTCCTACTGGATGAAAATTTCAAGCCAAAACTTTCTGATTTTGGACTCGCTAGGGAGGGACCGGTAGCTGGAGATACTCATGTTTCAACTGCTGTAATGGGGACGCATGGTTATGCCGCTCCAGATTACATTGAGACAGGCCATCTCACCGCCAAGAGTGACGTGTGGAGTTTCGGCGTTGTGCTATATGAAATGCTTACCGGTAGACGTTCATTGACAAGAAACAGGCCGAAAACGGAACAGAAACTATTGGAATGGGTAAAAAACTATCCTCCTGATAGCAAAAGGTTTGACATAATAATGGATCCAAGACTTGAAGGACAATATTCAATTAACGCAGCGCGGAAAATTGGCAAGCTCGCAGATCATTGCCTGCGTAAGAGCTCGAAAGATAGGCCGACAATGAGTCAGGTGGTAGAGAGATTGAAGGAAATAATCCAAGCTTCTGATGAAGAACAAGAAGAACATCATGAGCCTAATGAGATAGACATTGTTGAGGTATCTGAAAATGATTCATTTGAGCATCAAGAAGAGGCAAATTCATCAGGCTCTACGGAGTTATGGAGAAAAAGAATGGAACATCTTGCAAAACTTGGTGAACATGTGGAGGGTGCTAACAGAAAAAGGTTTATGATTCAACAGAGAGCCAATGTGTCTTCATAG 1308 0.4151 MNCFSYFKHKYKGRGQRSAPELKEQEKHQFSGSERVTKSSCSSTSSPRGIPKLYEEKGHNLRVFSFSELSRATSDFSRLLKIGEGGFGSVFKGSIKPVDGNGNPILVAIKRLNKDALQGHKQWLTEVQFLGVVDHPNLVKLIGYCAVDGERGIQRLLVYEYMPNRSLEAHLFNKAYDPVPWKTRLEIALGAAQGLSYLHEELEVQVIYRDFKCSNVLLDENFKPKLSDFGLAREGPVAGDTHVSTAVMGTHGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLTRNRPKTEQKLLEWVKNYPPDSKRFDIIMDPRLEGQYSINAARKIGKLADHCLRKSSKDRPTMSQVVERLKEIIQASDEEQEEHHEPNEIDIVEVSENDSFEHQEEANSSGSTELWRKRMEHLAKLGEHVEGANRKRFMIQQRANVSS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0180 435 MobiDBLite consensus disorder prediction 34 49 - -
Mal5g0180 435 MobiDBLite consensus disorder prediction 15 50 - -
Mal5g0180 435 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0180 435 ProSitePatterns Protein kinases ATP-binding region signature. 82 110 IPR017441 GO:0005524
Mal5g0180 435 MobiDBLite consensus disorder prediction 15 33 - -
Mal5g0180 435 PANTHER OS01G0588500 PROTEIN-RELATED 27 418 - -
Mal5g0180 435 CDD STKc_IRAK 82 360 - -
Mal5g0180 435 Pfam Protein tyrosine and serine/threonine kinase 81 357 IPR001245 GO:0004672|GO:0006468
Mal5g0180 435 PANTHER OS07G0495150 PROTEIN 27 418 - -
Mal5g0180 435 Gene3D Transferase(Phosphotransferase) domain 1 162 387 - -
Mal5g0180 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Mal5g0180 435 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Mal5g0180 435 Coils Coil 350 370 - -
Mal5g0180 435 SUPERFAMILY Protein kinase-like (PK-like) 59 381 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0180 Mal-Chr5 3220014 3223737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0180 1 394 Glycoside Hydrolase AT3G07070 41.849 1.19e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal5g0180 PK_Tyr_Ser-Thr 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0180 - - cam:101511022 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0180 5 3220014 3223737 Mal5g0180 5 3220014 3223737 ECH