Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0174 ATGACAATCATTACAACACCTAGTGTTGGTATGGAATTTGACAGTGTAGATGAAGCTTGGAAATTTTGGCTTAATTATGGAAAAGAAATTGGTTTTGGAGTCAGAAAACAGTACTTTAATAAAAAGGGAGATGGGTCCATTAGATCGTGCAGATTTGTTTGTTGCAAGGAGGGTTATCGAGCGAAAGATAAAAGGTCATATTTAGTTAAGAACCCTAGGGCTGAAACAAGAACTGGTTGTGAAGCAAGAATCGCACTTTGTGTAAAGAATGAGAAATTTGTGATCCAAGAGTTCAAAGGGGACCATAACCACCCTTTACAACTTCCTGAAACAACACACATGCTAGCATCTCACCGTAAAATATCTGAAGTCCAAGCACATGAGATTGAAATGGCAGAGGACTGTGGATTGATGCAAAAATCTTCATTTCAGCTTATGAGTGCACATGCTGGAGGAAGAACTAATCTTGGATATACACCATTGGATGCTAGAAACTACCTCCAAGCAAAAAGAAAACGAAGCATGGCGTATGGAGAAATTGGTTGTCTCATGGGGTATTTTCAAACTCAATCATTGGAGAATCCATCATTTTACCATGCATATCAAATGGATTGTGATGAACAAGTCACAAACGTGTTTTGGGCTGATGCAAAAATGATCTTAGACTATGGTTATTTTGGTGAGGTAGTTTCTTTGGATACAACATACTGCACCAATCGCGCTAATCGACCATTGGCATTGTTTTCAGGCTTCAACCACTATAGGGGCACAATCATTTTTGGAGCTGCCCTTTTGTATGATGAAACATCTGAGTCATTCAAATGGTTGTTCAAAACTTTTCTTGAAGCACATGGAAACAAAAAGCCGCGAACTTTGTTCACTGATCAAGACCAAGCAATGGCTAAAGCACTAGCAGAGGTAATGCCAGATACACGGCATGGGTTATGCACATGGCACTTAATGCAGAATGGGATCAAACATCTTGGTTACTTGATGAAAAAAGAAAACCATTTCTTGACTTATTTTAAGAAGTGTATGTATGATTATGACCAAGAAGCAAGGTTTGAAGAAGCTTGGAGTAAATTGATTGTTGAATTTAATGTTCATGACAAGACGTGGGTGAAATCAATGTATGATATCAAGGAAAAATGGGCAGCATGTTACATGAAGGATGCATTCACGCTTGGAATGCGAAGTACTCAACTCAACGAGAGTTTAAATTCAAATTTCAAGGCTTGCATGAAACCAAGAATTAATATCATTCAATTCTTCAAACACTTCGAGAGAGTTGTTGCGGAGAAACGATATAACGAGTCAAGATGTGAGTATGAGTCAAGACACAAACTACCAAGGATAAGATATGGACATTCACCAATTCTAATGCAACTCGCAGAGGTATACACTCATACAATTTTTGACTTATTCCATGATGAGTTTGATTTGTTTTTAGCTGCTTGCATAAGAGAACGAAAGGTATCCCAACAGCCATTTGAATATATTATTGCTTTGGTCGGTAAGGAAGGAGAGTGGAAAGTACTATTTGATCCTATTCAATCCTCCATATCATGTAGCTGTAAAAAGTTTGAGACTTTTGGAATACTTTGTTGCCATGCTTTGAAGGTTTTTGAGGCAAATGATGTTAAAGTTGTCCCTGATCAATACATTTTAAAAAGGTGGACTAAAAATGCACGAAGTGGTATTATCTTTGATGTTAGGAGACATGAAGTTGTGGAAGATCCCAAATTATGTAGTATACAACGATACAAGCAGCTTTGCTCTACTATGATTAGATTAGCAGTTGATGTGTCACCTTTCGATGATTTGTCCGAACTGGTACAGAATGGATTGCATGACCTGTGTAACAAAGTAAAGGAGGTTCGATTACAAAAAAAATGTGAATTGACTCAACCAAAGGGATTTAAGAACCGAATTGGGTTAGCAAGGCGTAAGAGGGGAAAAAGTTGGATTGAACGTCAACCAACAACAAGAAAAGCTCCAACCATAACACCGTCTTTGAGTCAAAGATCTCAGGTATATAAATTAGTTAGTTGCAATCTCAGGTCTTTAACCTTCCTTGTATTTATTATGTGCTAA 2094 0.3763 MTIITTPSVGMEFDSVDEAWKFWLNYGKEIGFGVRKQYFNKKGDGSIRSCRFVCCKEGYRAKDKRSYLVKNPRAETRTGCEARIALCVKNEKFVIQEFKGDHNHPLQLPETTHMLASHRKISEVQAHEIEMAEDCGLMQKSSFQLMSAHAGGRTNLGYTPLDARNYLQAKRKRSMAYGEIGCLMGYFQTQSLENPSFYHAYQMDCDEQVTNVFWADAKMILDYGYFGEVVSLDTTYCTNRANRPLALFSGFNHYRGTIIFGAALLYDETSESFKWLFKTFLEAHGNKKPRTLFTDQDQAMAKALAEVMPDTRHGLCTWHLMQNGIKHLGYLMKKENHFLTYFKKCMYDYDQEARFEEAWSKLIVEFNVHDKTWVKSMYDIKEKWAACYMKDAFTLGMRSTQLNESLNSNFKACMKPRINIIQFFKHFERVVAEKRYNESRCEYESRHKLPRIRYGHSPILMQLAEVYTHTIFDLFHDEFDLFLAACIRERKVSQQPFEYIIALVGKEGEWKVLFDPIQSSISCSCKKFETFGILCCHALKVFEANDVKVVPDQYILKRWTKNARSGIIFDVRRHEVVEDPKLCSIQRYKQLCSTMIRLAVDVSPFDDLSELVQNGLHDLCNKVKEVRLQKKCELTQPKGFKNRIGLARRKRGKSWIERQPTTRKAPTITPSLSQRSQVYKLVSCNLRSLTFLVFIMC* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0174 697 Pfam SWIM zinc finger 519 544 IPR007527 GO:0008270
Mal5g0174 697 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 632 IPR031052 GO:0006355
Mal5g0174 697 SMART 26again6 521 548 IPR006564 GO:0008270
Mal5g0174 697 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
Mal5g0174 697 Pfam MULE transposase domain 229 323 IPR018289 -
Mal5g0174 697 ProSiteProfiles Zinc finger SWIM-type profile. 499 546 IPR007527 GO:0008270
Mal5g0174 697 PANTHER OS03G0181600 PROTEIN 6 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0174 Mal-Chr5 3159852 3161988 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g0174 MULE 1.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0174 - - cam:101507984 811.601