Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0171 ATGTCCTTCAATCAATCAAAAACCGAAAAGAACGACGCCTTTTATCGAAAATCTGGGCGATCGTCTAGCTTTAATCAGCAGAGAGGTCCCTCAGGTGGTCATGGAAGGGGCAGCGGCGGCCCCGCGCCGGCTTCATCACTCTCCGCTAATAGGAGTTTTAGCAAGAAGAATAATAATGCACAAGGTGGGCAATATAGGGTGAACCCTTCCCCAGTGAATTCAACCGAACCAAACAGTACTTATGCTGCTCGAACCATACATAACGGTACTCATGTGCAACCACCTATGCATGGAGCATCTGATGGGCCGGTTGCAAAGGTATCTGAATCAGCAGCTGCACAGAGGAGCCCTAGAGTTGTTCCAAATGCACCAACTTCTCAACCGCCCCCCGTTAGCTCCGATACAACCGCTCCTACAAGCTCTGCTAAGGGAGATACATCAAAGGCATTCCCTTTTCAGTTTGGATCGATTGCTCCTGGTGTTATGAATGGGGTGGCTATTCCTGCTCGTACAAGCTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGCTCGTCATGACTCTATTAAACCCGTGCCTTCAGTGCCAATCCCTACTGTTCCGAAGCAGCAGCAGCCACCTAGGAATGATGCAGGTGTAACCGAGAAAACTAATGCCAGAGATACTCATCCGGGGGCTAAGTCTAAAAAGGATCCCCAGGCACCAGCTTTGACCCCGGCAAGCCAGATGCAGAGGCCTTCTGTTGTTCCTGTACCTGGGATTTCAATGTCAACACCATTTCAGCAGTCACAGGCATCTTTACAGTTTGGTGGTTCTAATCCACAAATTCAATCTCAGGGGATGTCTTCGACACCCATGCATATTCCTATACCAATGCCTATACCAATCGGAAATGTTGCACAAGTGCAACAGCCGGTTTTTATTCCAGGTCTTCAGCCTCATCCAATGCACCCTCATGGGATGATGCATCCAGGCCATAACTTAAGTTTCGCTCATCAAATGGGTCATCAGTTACCCCATCAATTGGGCAACATGAGCATTGGAACTGGCCCTCCATATCCCCAGCAGCAGGGTGGAAATTTTACCGGTCCTCGAAAAACTACTACTGTCAAGATAACTCATCCTGAAACGCATGAAGAGCTAAGGCTTGATAAAAGGGCAGATGGATATTCAGATGGTGGGTCATCTGGTGCTAGGCCGCATCCTAATGTACCTTCTCAATCCCAACCTGTTAAATCCGTTGCTGTTTCTCAGCCTACGAATTATTATCCTTCCGGCCCATATAGTTCCAGTCCTCCCTATTATCAACCTTCTAGTTCTCTCCCATTAACAAGTAACCAGATTACTCCCAACACTCAGCCACCGATATTTAATTATCCTGTGAACAATGGTCCACAAAATGTGGCTTTCATGAATTCATCGTCTCTTAGTTCTCTGCCTGTTAATAAAGTCAGCACTCCTATTCCTCACATTGCTGAACCTCCCATTGCAGAACGTTCTCGTGAAGTGCCTAAAGTGACGTCATCAGCTCCAACGGGGGTTTCTGTGACTATTAAACCGAGTGGGCTTTCTGCTGTTACAGACTCGGCATTGACTAATTCTAGTATCCGTGGTGTTCAAAATCCCGAAACTTCCCCGGAAATCTCTACACAGCATTCTAAATCTTCTGAGGATTCTTCAATTTTGAATTCACTGCAAAAACAATCTGCTGCATCTGTTGTCACTGCTGAGAAGCTTACAACGCTACCCACGCCAGCTGTGACTGAGGATTCTGTTTCAGTTGTGACTAACAATGAAGCCAACATGAGGGAACCTATTAGTTGGTCCAACTCGTCGAAGGATAACCAGAAGAAATCTGAGAAAATAGGTCAATCATCTCAAGATCAGGTTTCTGTGCAATCTCCTACAGCGGCTAATTTGCAGTCTCAAGCTGTTGACAGTGGTATATCTGATACTGGGGTTTCCACACCTGTAGGAAGTGAAACAAACCATTCTCCTGCAATTATTGCCGAAGATCTTCTCACATCTGAAGGATCTATTGCTGAAGCGGATGACAGTTTAAGTAATCGTAAGCATGATAAGATAGATGAATCATCTGAAGATCTGCAGTCTGCTGATTTACCAGAAACAACCAAGGAAATCAATGATAGTGCAGAGAATGCTTGCAGCGACTCAATGTCTCTTTCAGTGTCAGGTACCAAGGATAGACCAAATTTAGAACCAAATAAGGCGAAAATTACATACAAAGGGAAGAAGAAAAGAAAAGAGATTCTCCAGAAAGCAGATGCTGCTGGGACAACTTCTGATCTTTATAATGCATACAAAGGACCTGATGAAAAGAAAGAAACTGTCTTAATTTCAGAGAGCTCAGAAAGTGAATCTACATCTGAAGTTTTAAAGCAGCTATCTACAGATTCTGCTCAGTTAGATGCTACCGTAAGTGAGGAAGGTGGTCACAATAAAGCCGAACCTGATGACTGGGAGGATGCAGCTGACATTTCTACACCAAAACTTGAAGTTGATGATAAATCTCAACAGGTTATTGATGGAAGTACAGAAAAAAAGTACTCACGTGATTTTCTTTTGAAATTCGCAGAGCAGTGCATTACTCTTCCTGAAGGTTTTGAAATTAAGGAAGACATAGCTGAGGCTTTGATGAGTGGCAATATTAATAATTCTCGTGATTCACATCCTAGTCCTGGAAGAACTGTAGACAGGTCAAGGATGGAACGCCGTGGGAATGTTGTGGCTGACGAAGACAAATGGAATAAAGTTTCCAATGTTTTTAATTCTGGGCGTGTTTTGGATGGTAATGGCGGATTTCGACAAGGAGGACAAGGAGGCAGTTTTGGTGTTTTAAGGAATCCTCGTGGACAAGCACCCCCTCAATTTGCTGGGGGGATCCTTTCTGGGCCATTGCAATCTGGGGGACATCAGGGTGGAACGCAAAGGAATAGCCCTGACGGGGAGAGGTGGCAGCGTTCTACTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTCAGTCTCCCTTACAGATGATGCACAAGGCTGAGAAGAAGTATGAAATAGGTAAAGTCTCAGATGCAGAAGAGGCAAAGCAGAGGCAACTGAAAGCTATCTTGAACAAACTAACTCCTCAGAATTTCGATAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGACAACGCAATCACTCTCACTGGTGTTATCTCACAAATCTTCGAGAAGGCTCTGATGGAACCTACCTTCTGTGAAATGTATGCAAACTTCTGCTCACATCTGGCTTCTGAGTTGCCTGATTTGAGTGTGGACAATGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAATGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAGGCAAATAAGGTTGATGAGGCCGAGGGTGAGGTCAAGCTGTCAAATGAAGAAAGGGAGCAGAGAAGAACTCAGGCAAGAAGGCGCATGTTAGGGAACATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCACGAGTGTATAAAGAAGTTACTAGGTCAGTGTCAGGATCCTGATGAGGAAGATGTTGAGGCTCTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCTAAGGAACATATGGATGTATATTTTGAAAGGTTGAAAATATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTTATGTTGAAGGATGTAATTGATTTGAGAAGGAATAGATGGCAAGTAAGGAGGAAAGTTGATGGTCCAAAAAAGATTGAGGAGGTACACAGAGATGCTGTGCAAGAGAGGCAGGCTCAAGCACAAGCTGGTAGGATGGGTCGTGGTATGGGAAACAATCAATCTGCAAGAAGGAACCCCATGGATTTTGGTCCTAGAGGATCACCTATGTTGTCTCCTACTTCTCCGATGGGTGGACCGCGTGGGATGTCTACTCAAGCACGTGGATATGGTTTACAGGATGCTCGTTTTGAAGAAAAGCAATCTTATGAGCCTAGGACTTTGTCAGTTAATTTTACTCAAAGACCCTTGGGTAATGATTCTATAACATTGGTACCCCAAGGCGGTCTTGCTAGGGGAATGTCCAGTAGAGGATCAACAATTTCGTCAATACCTGATGTGCATTCTGGCCCTGGAGACTCTCACAGAATGCCTAGCGGTATTAATGGTTTTAGCAATTTATCTGAGCGCACACCGTACGGCTCTAGGGAGGATCTTGCATCAAGATATATGTCAGATAGACCTTCAAGTCCAGCTGGATATGATCATTCAAGTGCTCCAGCGCATAATACAAACTATGGTAACAGAGACTTAAGGAATGATGATCGGAATCTCAACAGGCCTGTTGCAACTTCACCTCACACTCAGTCGCAAGGGCCAGTTATCTCCCAAAATGCTTCTTCAGAGGAACGACTACGGGACATGTCCTTGTCAGCAATCAGAGAATACTATAGTGCTAGAGATGTAAATGAAGTTGCTCAATGCATCAAAGATTTGAACTCTCCAAACTTTCATCCTTCCATGGTTTCTCTCTGGGTCACAGACTCATTTGAGAGAAAGGACACTGAACGAGGTCTTTTGGCCAAGCTGCTTGTCAAACTTGGGAAATCTCAGGATGGCCTCTTGAGTCAAACTCAGCTTGTCGGAGGGTTCGAGACAGTTCTCGGTACATTGGAGGATGCTGTTAATGATGCCCCCAAGGCACCAGAGTTTCTTGGCCGAATTTTTGCAGAACTTATAACAGAGAGTTTAGTCAGTTTGAATGAGATTGGGCAGTTGGTACATAATGGTGGAGAGGAGCCAGGAAGTCTCTTAGAATTTGGACTTGCAGCTGATGTTCTTGGAAGCACATTGGAGGCAATAAAGCATGCAAAAGGGGACGCTGTTCTAAGCGAGATTCGAACAAGTTCAAACTTGCGGTTGGAGTCTTTCCGACCACCTAATAATTCTAGCACATCAAGGAAGTTGGAGCAATTTATTTAG 5043 0.4432 MSFNQSKTEKNDAFYRKSGRSSSFNQQRGPSGGHGRGSGGPAPASSLSANRSFSKKNNNAQGGQYRVNPSPVNSTEPNSTYAARTIHNGTHVQPPMHGASDGPVAKVSESAAAQRSPRVVPNAPTSQPPPVSSDTTAPTSSAKGDTSKAFPFQFGSIAPGVMNGVAIPARTSSAPPNLDEQKRDQARHDSIKPVPSVPIPTVPKQQQPPRNDAGVTEKTNARDTHPGAKSKKDPQAPALTPASQMQRPSVVPVPGISMSTPFQQSQASLQFGGSNPQIQSQGMSSTPMHIPIPMPIPIGNVAQVQQPVFIPGLQPHPMHPHGMMHPGHNLSFAHQMGHQLPHQLGNMSIGTGPPYPQQQGGNFTGPRKTTTVKITHPETHEELRLDKRADGYSDGGSSGARPHPNVPSQSQPVKSVAVSQPTNYYPSGPYSSSPPYYQPSSSLPLTSNQITPNTQPPIFNYPVNNGPQNVAFMNSSSLSSLPVNKVSTPIPHIAEPPIAERSREVPKVTSSAPTGVSVTIKPSGLSAVTDSALTNSSIRGVQNPETSPEISTQHSKSSEDSSILNSLQKQSAASVVTAEKLTTLPTPAVTEDSVSVVTNNEANMREPISWSNSSKDNQKKSEKIGQSSQDQVSVQSPTAANLQSQAVDSGISDTGVSTPVGSETNHSPAIIAEDLLTSEGSIAEADDSLSNRKHDKIDESSEDLQSADLPETTKEINDSAENACSDSMSLSVSGTKDRPNLEPNKAKITYKGKKKRKEILQKADAAGTTSDLYNAYKGPDEKKETVLISESSESESTSEVLKQLSTDSAQLDATVSEEGGHNKAEPDDWEDAADISTPKLEVDDKSQQVIDGSTEKKYSRDFLLKFAEQCITLPEGFEIKEDIAEALMSGNINNSRDSHPSPGRTVDRSRMERRGNVVADEDKWNKVSNVFNSGRVLDGNGGFRQGGQGGSFGVLRNPRGQAPPQFAGGILSGPLQSGGHQGGTQRNSPDGERWQRSTSFQQRGLIPSPQSPLQMMHKAEKKYEIGKVSDAEEAKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAITLTGVISQIFEKALMEPTFCEMYANFCSHLASELPDLSVDNEKITFKRLLLNKCQEEFERGEREQEEANKVDEAEGEVKLSNEEREQRRTQARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQCQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDVYFERLKILSNNMNLSSRVRFMLKDVIDLRRNRWQVRRKVDGPKKIEEVHRDAVQERQAQAQAGRMGRGMGNNQSARRNPMDFGPRGSPMLSPTSPMGGPRGMSTQARGYGLQDARFEEKQSYEPRTLSVNFTQRPLGNDSITLVPQGGLARGMSSRGSTISSIPDVHSGPGDSHRMPSGINGFSNLSERTPYGSREDLASRYMSDRPSSPAGYDHSSAPAHNTNYGNRDLRNDDRNLNRPVATSPHTQSQGPVISQNASSEERLRDMSLSAIREYYSARDVNEVAQCIKDLNSPNFHPSMVSLWVTDSFERKDTERGLLAKLLVKLGKSQDGLLSQTQLVGGFETVLGTLEDAVNDAPKAPEFLGRIFAELITESLVSLNEIGQLVHNGGEEPGSLLEFGLAADVLGSTLEAIKHAKGDAVLSEIRTSSNLRLESFRPPNNSSTSRKLEQFI* 1681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0171 1680 MobiDBLite consensus disorder prediction 373 391 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 1 259 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 600 666 - -
Mal5g0171 1680 SMART ma3_7 1492 1606 IPR003891 -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 624 665 - -
Mal5g0171 1680 Pfam MA3 domain 1497 1602 IPR003891 -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 1285 1334 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 706 738 - -
Mal5g0171 1680 Coils Coil 1118 1158 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 349 372 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 216 230 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 1361 1490 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 939 1014 - -
Mal5g0171 1680 Gene3D - 1036 1273 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 1465 1490 - -
Mal5g0171 1680 ProSiteProfiles MI domain profile. 1491 1615 IPR003891 -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 600 615 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 1661 1680 - -
Mal5g0171 1680 Gene3D - 1483 1680 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 535 566 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 1380 1394 - -
Mal5g0171 1680 SUPERFAMILY ARM repeat 1485 1676 IPR016024 -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 1128 1155 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 686 703 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 17 32 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 349 453 - -
Mal5g0171 1680 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 118 1669 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 402 453 - -
Mal5g0171 1680 Pfam MIF4G domain 1036 1259 IPR003890 GO:0003723|GO:0005515
Mal5g0171 1680 MobiDBLite consensus disorder prediction 977 1009 - -
Mal5g0171 1680 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 118 1669 IPR045208 GO:0003743
Mal5g0171 1680 MobiDBLite consensus disorder prediction 129 147 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 685 743 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 891 913 - -
Mal5g0171 1680 MobiDBLite consensus disorder prediction 43 87 - -
Mal5g0171 1680 SUPERFAMILY ARM repeat 1030 1262 IPR016024 -
Mal5g0171 1680 SMART if4_15 1036 1260 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0171 Mal-Chr5 3092646 3102125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0171 1 1679 Eukaryotic Initiation Factors Gene Family AT3G60240 45.136 0.0 1221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0171 K03260 - gmx:100798562 2068.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0171 5 3092646 3102125 Mal5g0171 5 3092646 3102125 ECH
Mal5g0171 5 3092646 3102125 Mal3g1489 3 65221207 65230201 PCT