Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0134 ATGGAAGGAGAAAGAGATGTTCCCAATTATGATCTCCAAGTTTCATTCACAAATACCCCTCAAGCTATTCATGAAATGGGTTTTGTTCAATTTGAAGAAAATCAAGTTCTTAGCTTCTTGTCACCCTCTACACAATCCCAACCTTCTCAACTTTCTCAATCTCTAAATTCCGGCGGTAGCACCACCAACGCCACTACCGGTGCAGCCGTCACAACTACCACCGTGGCTGCCGGATTTAGCCATAATGATCTTGTCACTAGAACTCCTTGGAATAACGAACAGGTGAGAACTCTAGATCCCAAAGCTGTGAGTGATGAGAATTGCACCGGAAATACTAGTGATGGTAACAACACATGGTGGAGGAGTGGAGGAGCAGAGAAGAGCAAGGTGAAAGTGAGGAGGAAACTTAGAGAGCCAAGGTTTTGTTTCCAAACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTACCGTTGCACACATAACAATTGTCGGGTGAAAAAAAGAGTTGAACGACTCTCAGAAGATTGTCGTATGGTAATAACCACTTATGAAGGCAGACACAATCACTCTCCTTGTGACGATTCTAATTCTTCTGAACACGAATGTTTTACCTCTTTCTGA 681 0.4229 MEGERDVPNYDLQVSFTNTPQAIHEMGFVQFEENQVLSFLSPSTQSQPSQLSQSLNSGGSTTNATTGAAVTTTTVAAGFSHNDLVTRTPWNNEQVRTLDPKAVSDENCTGNTSDGNNTWWRSGGAEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0134 226 MobiDBLite consensus disorder prediction 103 122 - -
Mal5g0134 226 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g0134 226 Gene3D WRKY domain 138 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g0134 226 ProSiteProfiles WRKY domain profile. 147 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g0134 226 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 12 224 - -
Mal5g0134 226 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g0134 226 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 224 IPR044810 GO:0003700
Mal5g0134 226 SUPERFAMILY WRKY DNA-binding domain 144 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g0134 226 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0134 Mal-Chr5 2523175 2530102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0134 3 226 WRKY Transcription Factor Family AT2G44745 58.190 3.72e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal5g0134 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0134 - - var:108347245 377.481