Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0111 ATGGCCCCTTTTCTTCTCAAATTCGACATAACAAATGCCTCTCTCATGCAGTTCAAACTCACAAGCAACAACACCTTATATTACAACTTTAAGGTTAACATTACAGCAAAAAACTCCAATAGAAAAATAATAATCTATTATAGGAGGATCACAGCAATTGCTCATTACAAAGATAATGATTTTGCTTGGGAGAGTTTGAAACCCTTTGACCATAGGCCTAAGGATACTAGTTTACTTGGACCAATAGTGTTTCAAGGAAATTACTTGATCAACCTGAAACCTAAACAACTTGATGAATATAATGAAGAGACACACAAGGAAATTTATAATGACTTGGCTGTGGATTTAGGTATTCAAAGTAGAGCAAAATTTGGATGGATTAAGAGGAGTCGTTTTACACTAGTGCAGTGTCGTACCTTGAGAGTTCCTTTGATTTCTAATGGTGAATCATCACCTATTTTCAACATCACTAGATGCAAATGTCAGTCACAGTACATCAAGGTCCCGATCATGGCGGTTGTGGCGACAACAGTGATTATTTCAGCCATGGTCATATCATGA 561 0.3672 MAPFLLKFDITNASLMQFKLTSNNTLYYNFKVNITAKNSNRKIIIYYRRITAIAHYKDNDFAWESLKPFDHRPKDTSLLGPIVFQGNYLINLKPKQLDEYNEETHKEIYNDLAVDLGIQSRAKFGWIKRSRFTLVQCRTLRVPLISNGESSPIFNITRCKCQSQYIKVPIMAVVATTVIISAMVIS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0111 186 PANTHER HARPIN-INDUCED 1 6 163 - -
Mal5g0111 186 PANTHER OS05G0367900 PROTEIN 6 163 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0111 Mal-Chr5 2220371 2220931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0111 6 109 SNARE and Associated Proteins AT1G32270 29.808 4.38e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0111 - - mtr:MTR_2g048270 218.779