Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0100 ATGGAGAGGTATTCAGAGCCAAAGGTACTGCCACGAACCTTGCCGGTTCTGGTTGAGGTATCGCCACACACGGTGGCCACTGCAAGAGAGGCGGGTCAGAGACTAAATGGGCAGGAGTTTTCAAATGCTAGGTGGATTTCAGCTAGAGAATTGAATCAATTGTCGCAGGGAAGGGATGTGCCTATGACACGTTTGGCCTCGATCAGAGAAGTGGCTCAGTTGTCAAATGCACGGATATTATTGGTTCAAGATGATATGGAATTTGATACCAGAGAGTCACCAGAGTCTATCTCCTTTGAGCCTACTAGAACATGGAAAGGAAAGACCTCTTTACCTGAAGGAGAAGATCTGATGTATGATGTAGACACATTGAAGGAAAGCAGCGATTCGTTTGAGGATGGTGATCCGAGTTTATTTGCCGGCGCTAGTCATCCCCCAGAACCTGTTGATACAGATCTTATGAGAACGGTTTATGTACCGATAGGTCAAAACAAATCTGAGTCCGGATGCTTAATTAAGAACTTGTCCATGAAGGGCCCTTTCCTGGAAGATCTCTCAATCCGTGTTCCCGGGAAGAAACCAAGTCCAATTGTTCTTTCCCCTCAAGAAAGTCTTGTTGAAGAACTGAATGACACGGGGAACATATCCTCGCCTTTCGCGGGTTCTCGAGCGTCTCAGAATACTGAGAACTCTCTACTTGCTCCGGATTCCGAGGAAAAGGAATGTGTTTGGGATGCTTCTTTGCCACCTACACCTAATGGGAATGCCAGTCCACATAGTAGTATCGATAGTGTCGGTGTTGTCAAGGCAATGAGCATTGCTAATAGTTGCGCTAGTACATATCGTAGTGATGCAATGACCAGTGACGGCATGCTTAGTTTAGATAGAAACTTTGATAGCACTAAGTGTAGTGTAAGGGGTGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTTAGTGATGACAGTAACTGGAGCAACCTTACTGGTAGTGCCAATAAGCCTCATAAAGGAAATGATCCCAGGTGGAATGCTATACTTGCTGTCCGATTACGAGATGGAATTTTGGGCATGAGTCATTTTCGATTACTCAAACGACTTGGATGTGGTGACATTGGGAGTGTATATCTCTCGGAGCTGAGTGGAACTCGGTGTTATTTTGCAATGAAGGTTATGGACAAGGCGTCCCTAGCAAGCAGAAAGAAGCTGACTAGAGCACAGACGGAGAGAGAGATATTGCAGTTGCTTGACCATCCATTTCTTCCAACTTTGTATACACATTTTGAGACTGACCGTTTCTCTTGTTTGGTAATGGAATATTGTCCTGGGGGTGACCTACACACTTTAAGGCAGAGGCAACCTGGGAAACATTTCTCTGAATATGCTGCGCGCTTTTATGCTGCAGAGGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTACAGAGACCTTAAACCTGAAAATGTGTTGGTTCGAGACGATGGTCACATAATGCTTTCGGATTTTGATCTTTCCCTCAGATGTACTGTTTTGCCGACTCTTGTTAGAGGTTATGATGGTGACCCTTCAAAACGGGCTGGTGGTGCATTCTGTGTTCAGCCTGCTTGTATTGAGCCAACATCAGTATGCATACAACCTGCATGTTTTATTCCTCGTCTCTTTCCTCAGAAAAACAAGAAATCAAGGAAGCCAAGAGCTGAACCTGGGTTTCCTTCCAGCAGACTTCCAGAGCTTGTTGCTGAGCCTACTGCGGCTCGATCTATGTCCTTCGTCGGTACCCATGAATACCTCGCTCCTGAAATTATCAAAGGGGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATATTCTTGCATGAACTATTATATGGTAAAACTCCTTTCAAAGGGTCAGGAAATCGTGCTACACTTTTCAATGTAGTAGGTCAGCAACTCAAATTTCCCGATTCGCCTGCGACGAGTTACGCCAGCAGGGACCTGATCCGTGGATTGCTGGTGAAGGAGCCACAGCATCGTCTTGGGGTTAAAAGAGGTGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAACTGGGCATTGATTAGGTGCAGCACACCACCAGAAGTGCCAAGACCAGTGGAAAATGAGCCGCCGCCTCCACCGCCACCAATGAAGGTTGGACCACCAGTTGATGCTGTTGGGGTTGGCAATACTAGTAAGAGGATGTCAGGTAATAATGAAATGAAGTCTGGGGGTAAATATCTGGATTTTGAGTTCTTTTAG 2304 0.4579 MERYSEPKVLPRTLPVLVEVSPHTVATAREAGQRLNGQEFSNARWISARELNQLSQGRDVPMTRLASIREVAQLSNARILLVQDDMEFDTRESPESISFEPTRTWKGKTSLPEGEDLMYDVDTLKESSDSFEDGDPSLFAGASHPPEPVDTDLMRTVYVPIGQNKSESGCLIKNLSMKGPFLEDLSIRVPGKKPSPIVLSPQESLVEELNDTGNISSPFAGSRASQNTENSLLAPDSEEKECVWDASLPPTPNGNASPHSSIDSVGVVKAMSIANSCASTYRSDAMTSDGMLSLDRNFDSTKCSVRGDSLESAKTSASRASDSSGLSDDSNWSNLTGSANKPHKGNDPRWNAILAVRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVLPTLVRGYDGDPSKRAGGAFCVQPACIEPTSVCIQPACFIPRLFPQKNKKSRKPRAEPGFPSSRLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENEPPPPPPPMKVGPPVDAVGVGNTSKRMSGNNEMKSGGKYLDFEFF* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0100 767 Pfam Protein kinase domain 597 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0100 767 Pfam Protein kinase domain 369 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0100 767 MobiDBLite consensus disorder prediction 212 261 - -
Mal5g0100 767 Gene3D Phosphorylase Kinase; domain 1 366 451 - -
Mal5g0100 767 MobiDBLite consensus disorder prediction 212 233 - -
Mal5g0100 767 SUPERFAMILY Protein kinase-like (PK-like) 349 727 IPR011009 -
Mal5g0100 767 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 76 767 - -
Mal5g0100 767 SMART serkin_6 368 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0100 767 MobiDBLite consensus disorder prediction 715 755 - -
Mal5g0100 767 Gene3D Transferase(Phosphotransferase) domain 1 452 518 - -
Mal5g0100 767 ProSiteProfiles Protein kinase domain profile. 368 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0100 767 PANTHER FLIPPASE KINASE 1-RELATED 76 767 - -
Mal5g0100 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Mal5g0100 767 CDD STKc_phototropin_like 366 716 - -
Mal5g0100 767 MobiDBLite consensus disorder prediction 309 341 - -
Mal5g0100 767 MobiDBLite consensus disorder prediction 309 346 - -
Mal5g0100 767 Gene3D Transferase(Phosphotransferase) domain 1 596 717 - -
Mal5g0100 767 MobiDBLite consensus disorder prediction 717 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0100 Mal-Chr5 2088386 2091408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0100 1 767 AGC Kinase Gene Family AT2G44830 65.823 0.0 950
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal5g0100 Pkinase 2.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0100 - - mtr:MTR_8g006870 1438.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0100 5 2088386 2091408 Mal5g0100 5 2088386 2091408 ECH
Mal5g0100 5 2088386 2091408 Mal3g2960 3 104308301 104312087 PCT