Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0098 ATGAACACTCATGCTTGGAACACTAATGTGGCCACCCTTGATCACTTTGAATCTGCCACAAAGACACCGTTTCATGACACTTCAGCTCCGGCAGCACCGGCGCCAATTTCCCGGAGTTCAAGCTTTCGGAGCATTTTCTTTGCGGAGAATTGGGCGGAGCTGCCGTTGAAGGAGGATGATACCGAAGACATGGTCATCTACGGGGCTTTGCGCGAAGCTGCTGCCACCACGGGCTGGTTCCCGGTTAGTAACAATGTGGTGAACAATGCTGATGTAGCTGCGAAAATAGAAGATCAAGGTCAAAGTAGTACCACTTCTTCGTTGACGCGTGTTGCTCACGCGCCAACGACTAGTAAAAGGTTAGGCTACCGTGGAGTTAGGAGAAGGCCTTGGGGAAAGTATGCAGCGGAGATAAGGGATCCTAAAAGAAATGGCGCGAGGGTGTGGCTTGGGACTTATGAAACAGCTGAGAATGCAGCTTTGGCTTATGATCGAGCTGCGTTTAAAATACGTGGCTCGAAAGCTAAGTTGAATTTCCCTCATTTGATCGACTCAGATTACACTGGGTCGGTTAAGTTCACACGGAAAGAGCACTAG 597 0.4958 MNTHAWNTNVATLDHFESATKTPFHDTSAPAAPAPISRSSSFRSIFFAENWAELPLKEDDTEDMVIYGALREAAATTGWFPVSNNVVNNADVAAKIEDQGQSSTTSSLTRVAHAPTTSKRLGYRGVRRRPWGKYAAEIRDPKRNGARVWLGTYETAENAALAYDRAAFKIRGSKAKLNFPHLIDSDYTGSVKFTRKEH* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0098 198 Gene3D AP2/ERF domain 122 181 IPR036955 GO:0003700|GO:0006355
Mal5g0098 198 SUPERFAMILY DNA-binding domain 122 181 IPR016177 GO:0003677
Mal5g0098 198 SMART rav1_2 122 186 IPR001471 GO:0003700|GO:0006355
Mal5g0098 198 PRINTS Ethylene responsive element binding protein signature 162 182 IPR001471 GO:0003700|GO:0006355
Mal5g0098 198 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Mal5g0098 198 Pfam AP2 domain 122 172 IPR001471 GO:0003700|GO:0006355
Mal5g0098 198 CDD AP2 123 182 IPR001471 GO:0003700|GO:0006355
Mal5g0098 198 PANTHER DNA-BINDING DOMAIN 31 193 IPR044808 GO:0003700|GO:0009873
Mal5g0098 198 ProSiteProfiles AP2/ERF domain profile. 122 180 IPR001471 GO:0003700|GO:0006355
Mal5g0098 198 PANTHER BNAC04G53270D PROTEIN 31 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0098 Mal-Chr5 2063683 2064279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0098 38 193 AP2-EREBP Transcription Factor Family AT2G44840 54.487 1.11e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal5g0098 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0098 K09286 - gmx:100793366 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0098 5 2063683 2064279 Mal5g0098 5 2063683 2064279 ECH