Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0088 ATGCTACTGCTCTTATCTTCACCATTTTCTTCCTCACTCATGCAATCTTTTCCATTAAAATTCCTTTGTACTGTACAAGGACAAGGAGAATCAACTCATGGATGCACTAATCAAAAACCAAAGGATTCCATAGTGCAGGATAACTCCATAATATATCCTGAGAAAGTAATAAGGAGGAAACTTGTGCTTTCTGTTTTGGTCTCAACTTGTGTTTTTCCAACTTTATCTTCTCATGCAAAGACCAAAAATATGAATCCGTATAATGAAAAACGCGTCTTACAACAAAACAAGAATATACAAAGACAAAACAATGCACCCGATGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAGTAATAGCACCAGATAACTATATAACACGTGATTCGGGGCTAATTTTCCGAGATTTTGAAGTTGGTCAAGGTGATTGTCCAAAGGATGGTCAGCAGGTCACATTTCACTACGTTGGCTATAACGAATCAGGTCGCCGTATTGACAGCACTTATTTGCAGGGTTCTCCTGCTAAAATTCGCATGGGTAACAAGGCATTGGTTCCAGGATTTGAGGAAGGAATTAGAGACATGCGAGCAGGTGGAAAGAGAAGAATCATTATTCCCCCTGATCTTGGACCCCCGGTAGGACCTTCAACATTTTTCAGCTCAAAACAATTTGAAGTTTTTGATGTTGAATTATTAAGCATACAAAACTGTGAAAGAAGAACCATAGTAGGATTTTATTCTGATGTTGTATGCAAGTGA 765 0.3778 MLLLLSSPFSSSLMQSFPLKFLCTVQGQGESTHGCTNQKPKDSIVQDNSIIYPEKVIRRKLVLSVLVSTCVFPTLSSHAKTKNMNPYNEKRVLQQNKNIQRQNNAPDDFPNFIREGFEVKVIAPDNYITRDSGLIFRDFEVGQGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGSPAKIRMGNKALVPGFEEGIRDMRAGGKRRIIIPPDLGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIVGFYSDVVCK* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0088 254 SUPERFAMILY FKBP-like 71 237 - -
Mal5g0088 254 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 147 212 IPR001179 GO:0003755
Mal5g0088 254 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 22 254 IPR044239 -
Mal5g0088 254 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 150 237 IPR001179 GO:0003755
Mal5g0088 254 Gene3D - 83 244 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0088 Mal-Chr5 1927587 1931084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0088 140 239 Calmodulin-binding Proteins AT5G48570 31.373 1.76e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0088 - - mtr:MTR_8g006755 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0088 5 1927587 1931084 Mal5g0088 5 1927587 1931084 ECH