Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0060 ATGGCAGTTCCAAGTTCAAATGTCTTAAAATTTTCAATACTCCTAATCATACTATTTTCATTTGAGGCTAGAGAAACTATAGCTATTAGCCTTACCGAAATAGTTACTATTGTTAATAACGTAACTGATCCAACTCCCAAAACCATCACCGTTAATTGCAAATCTAAAGAAGATGATCTTGGATTTCATACACTCAAGTTTGGAGAAAGTTACAGGTTTTCATTCAGACCAAAAATATTATATCCAATTGTTCATCCAACGTTATTCTTCTGCAGTTTTACATGGTCTGATAACCCCCATCGTCATTATCTTGACATTTACAACCAAGATCGTGACAGGTGCTACCATTGCACATGGAAAATAAACGTAAATGGAGGCTGTTTGAACGACCATAGGTGTGGTCCTTGGAAAAGTGTCCAATTAATGGATGCATACAATACTTCAAAATGGTTGCGAAGGAAGGGGTTGGATGAATTGGGACATGCCCGCCCTCCAACTTTTTAA 504 0.371 MAVPSSNVLKFSILLIILFSFEARETIAISLTEIVTIVNNVTDPTPKTITVNCKSKEDDLGFHTLKFGESYRFSFRPKILYPIVHPTLFFCSFTWSDNPHRHYLDIYNQDRDRCYHCTWKINVNGGCLNDHRCGPWKSVQLMDAYNTSKWLRRKGLDELGHARPPTF* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0060 167 Pfam Plant self-incompatibility protein S1 35 137 IPR010264 -
Mal5g0060 167 PANTHER - 9 136 IPR010264 -
Mal5g0060 167 PANTHER S-PROTEIN HOMOLOG 18-RELATED 9 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0060 Mal-Chr5 1248370 1248873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0060 35 141 Carbohydrate Esterase AT3G16970 37.815 1.55e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0060 - - mtr:MTR_6g016935 181.03