Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0044 ATGATTTCAGCTGGTGCATCAATCATGTTTGGGCGTGGACCAACAAGGAAGAGTGATAATACCAAATATTACGATATTCTTGGTGTTTCAAAAAGTGCTAGTGAAGATGAAATCAAAAAAGCCTATAGAAAGGCAGCGATGAAGAACCATCCGGATAAGGGTGGGGATCCTGAGAAGTTCAAGGAGTTGGGTCAAGCATATGAAGTGTTAAGCGATCCTGAAAAGAAAGTACTGTATGATCAATATGGTGAAGATTCCCTTAAAGAAGGAATGGGGGGAGGAGCAGGAAGCTCATTTCACAATCCATTTGATATTTTCGAATCATTTTTTGGTGCAGGCTTTGGTGGTGGTGGTCCTTCACGTGCAAGAAGACAGAAGCAAGGAGAAGATGTGGTGCATTCTATCAATGTTTCCTTGGAGGATGTGTATAACGGCACTACAAAGAAACTATCACTTTCTAGAAATGCATTGTGCTCAAAATGTAAAGGGAAAGGTTCAAAAAGTGGAACAGCTGGAAGGTGTTTTGGATGCCAGGGCACAGGTATGAAGATTACCCGAAGGCAAATTGGACTGGGCATGATTCAACAAATGCAACACGTCTGTCCTGACTGCAAAGGAACTGGTGAGGTCATTAGTGAGAGAGATAGATGCCCTCAATGCAAGGGAAACAAGATTACTCAAGAAAAGAAGGTGCTGGAGGTGCATGTGGAAAAGGGGATGCAGCAGGGTCAAAAGATTGTATTCGAAGGACAAGCTGATGAAGCTCCTGACACAATCACGGGAGACATAGTTTTTGTCTTGCAAGTAAAGAGGCATCCAAAGTTTCGAAGGGAGCATGATGACCTCCATATCAATCACAATTTGAGCTTAACTGAGGCTCTCTGTGGCTTCCAGTTTAATGTCACACATCTTGATGGAAGGCAACTATTGGTCAAGTCAAACCCCGGCGAAGTCATCAAGCCAGGTCAACATAAAGCTATAAATGATCAGGGAATGCCACAACATGGCAGGCCGTACATGAAGGGTCGCCTATACATCAAGTTTAGTGTTGATTTCCCAGATTCAGGTTTTCTTTCCCCTAGCCAAAGCCTGGAATTAGGAAAGATATTACCTCAAAAGATAAGCAAGAACTTGTCACAAAAGGAGCTAGATGATTGTGAGGAGACCACCTTGCATGATGTCAATATTGAAGAGGAGATGAGTCGAAAGAAGCAACAGTCCCGTGAGGCATATGACGACGACGATGATGATGATGATGAGCACTCACAGCCTCGGGTGCAATGCGCTCAACAGTAG 1296 0.4367 MISAGASIMFGRGPTRKSDNTKYYDILGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKKVLYDQYGEDSLKEGMGGGAGSSFHNPFDIFESFFGAGFGGGGPSRARRQKQGEDVVHSINVSLEDVYNGTTKKLSLSRNALCSKCKGKGSKSGTAGRCFGCQGTGMKITRRQIGLGMIQQMQHVCPDCKGTGEVISERDRCPQCKGNKITQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTITGDIVFVLQVKRHPKFRREHDDLHINHNLSLTEALCGFQFNVTHLDGRQLLVKSNPGEVIKPGQHKAINDQGMPQHGRPYMKGRLYIKFSVDFPDSGFLSPSQSLELGKILPQKISKNLSQKELDDCEETTLHDVNIEEEMSRKKQQSREAYDDDDDDDDEHSQPRVQCAQQ* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0044 431 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Mal5g0044 431 Pfam DnaJ C terminal domain 132 353 IPR002939 -
Mal5g0044 431 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 16 431 IPR044713 GO:0006457|GO:0030544
Mal5g0044 431 SUPERFAMILY Chaperone J-domain 18 117 IPR036869 -
Mal5g0044 431 MobiDBLite consensus disorder prediction 385 410 - -
Mal5g0044 431 Gene3D - 121 271 - -
Mal5g0044 431 Pfam DnaJ domain 22 80 IPR001623 -
Mal5g0044 431 Gene3D - 272 354 - -
Mal5g0044 431 ProSiteProfiles Zinc finger CR-type profile. 145 229 IPR001305 GO:0031072|GO:0051082
Mal5g0044 431 SMART dnaj_3 21 75 IPR001623 -
Mal5g0044 431 Pfam DnaJ central domain 158 224 IPR001305 GO:0031072|GO:0051082
Mal5g0044 431 ProSiteProfiles dnaJ domain profile. 22 83 IPR001623 -
Mal5g0044 431 MobiDBLite consensus disorder prediction 385 431 - -
Mal5g0044 431 Gene3D - 158 224 - -
Mal5g0044 431 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 155 227 IPR036410 -
Mal5g0044 431 PRINTS DnaJ domain signature 24 42 IPR001623 -
Mal5g0044 431 PRINTS DnaJ domain signature 75 94 IPR001623 -
Mal5g0044 431 PRINTS DnaJ domain signature 55 75 IPR001623 -
Mal5g0044 431 SUPERFAMILY HSP40/DnaJ peptide-binding domain 129 273 IPR008971 GO:0006457|GO:0051082
Mal5g0044 431 CDD DnaJ_C 129 355 - -
Mal5g0044 431 CDD DnaJ_zf 158 224 IPR001305 GO:0031072|GO:0051082
Mal5g0044 431 SUPERFAMILY HSP40/DnaJ peptide-binding domain 275 354 IPR008971 GO:0006457|GO:0051082
Mal5g0044 431 CDD DnaJ 23 72 IPR001623 -
Mal5g0044 431 Hamap Chaperone protein DnaJ [dnaJ]. 19 383 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mal5g0044 431 Gene3D DnaJ domain 19 120 IPR036869 -
Mal5g0044 431 PANTHER CHAPERONE PROTEIN DNAJ A6 16 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0044 Mal-Chr5 852721 857580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0044 13 82 C2H2 Transcription Factor Family AT1G74250 40.506 5.03e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0044 K09503 - gmx:100800590 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0044 5 852721 857580 Mal5g0044 5 852721 857580 ECH