Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0022 ATGATGGAGGTTGATCGTAGAAATGAGGCAATGGAGGAGCTTGTGAGAGGGCGTGAGTTTGCCAACCAGCTTGGACAAGTGATGAAGAATAGTAATGATGAGTTAGCAGCAACAACATTATTTGCCCAACATCTTGTTCTTGTCAACAACGTTCTCAACTCATTTACCAATACCCTCTCCCTTTTGAAACTACAAACGGAGGACTTTTCCTTCATTACTTCAACTAAATCTCAGGAGAACTCACAAGAATACAAAAGAAGGTGTACTCACAAGGTAGATCAAAGATGCCAAGCAACCAAGCAAGTGCACAGAATTCAAGAAAAGCCACCCTCATATACGACCACCTATTACGACCACCACACTTGCAAAAGCACAGATGAAATCATATTTGAACCCACTTCTCCTCATGATCCCTCCATATTGCTTAGCTTTAACAACACATTCCCAACTCCAACCAAACAAGATTGTCCCTTTTTATCCTCACATGATTGTAAGGAGGAATTAGTAATTCCCTCACCTTCCTTGGATGATTATTTGCTCTCTCCTGAGCCCACTTTAGATAATTCCATTTCTACAAGCCAAGTCAATAGTGATACTAGTGCTCTATCATCAACATTTGAATCTGATGATGATGATCACAATGATATAATGATGATGTATGGTGATCTCTTGCATCATTCTGCTGAGCTTCATCATGATTTCTTTCACCCTTTTCTTGGATACATAGGAGATCAATCAACATTTGCCTATGTTTAA 756 0.3955 MMEVDRRNEAMEELVRGREFANQLGQVMKNSNDELAATTLFAQHLVLVNNVLNSFTNTLSLLKLQTEDFSFITSTKSQENSQEYKRRCTHKVDQRCQATKQVHRIQEKPPSYTTTYYDHHTCKSTDEIIFEPTSPHDPSILLSFNNTFPTPTKQDCPFLSSHDCKEELVIPSPSLDDYLLSPEPTLDNSISTSQVNSDTSALSSTFESDDDDHNDIMMMYGDLLHHSAELHHDFFHPFLGYIGDQSTFAYV* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0022 251 Pfam WRKY DNA -binding domain 86 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g0022 251 MobiDBLite consensus disorder prediction 187 208 - -
Mal5g0022 251 Gene3D WRKY domain 73 125 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g0022 251 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 85 IPR044810 GO:0003700
Mal5g0022 251 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 86 221 IPR044810 GO:0003700
Mal5g0022 251 SMART WRKY_cls 76 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g0022 251 MobiDBLite consensus disorder prediction 187 204 - -
Mal5g0022 251 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 8 85 - -
Mal5g0022 251 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 86 221 - -
Mal5g0022 251 SUPERFAMILY WRKY DNA-binding domain 86 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0022 Mal-Chr5 415380 416816 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0022 2 124 WRKY Transcription Factor Family AT1G80590 27.632 6.59e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal5g0022 WRKY 1e-05 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0022 - - lja:Lj3g3v0459900.1 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2498 3 96817538 96819383 Mal5g0022 5 415380 416816 PCT