Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal5g0020 | ATGAATGTTAGAGATGAGGCAATGAAGGAGCTTATGAAAGGGCAAGAGTTTGCTAAGCAGCTTGGACAAGTAGTACTAGAAGTGATGAAGAATAACAAAAACATGAATCATTTAGGAGCAACCCAACAACTTGTCAGCAAGGTTGTCAACTCATTTACCAATACCCTCTTCCTTTTGAACAAACATCATCAAAGGAAGGAGGAGGAAGACTTTTCCTTCATTATTAAATCTGAAGAGGACTCTCAAGATAGTTGCAAGACTACTACTTCTGCCGGTGGTGGTGGTGGTGGTGGTAGAGGATCTAACAAAAGAAGAAAAACTACAGAAACGTATGAGGAAGTGTCTGAAAGACCAACAGATGATGGGCATGAATGGAGAAAGTATGGTCAAAAAACAATCCTCAATTCCAAATACTCAAGAGAATTGAAGAGAAGCCTCCCTTGTATAAGACCACCTATTACTTACGGCCACCACACTTGCAACAAAAACAATATCATATTTGAACCCACTTCTCCTCATGATCCCTCCTCCATATTGCTTAGCTTTAACAACACATTCCCAACTCCAACCAAACAAGATTGTCCCTTTTTATCAATACCGTCGTCATCATCATCGTCATCTTTTAATTCCTCACCTTCCTTGGATGAATACCTGCTCTCTCCTGAGCCAATTTTAGATAACTCTATTTCTACAACACATGTTAACGTTAGTAGTACTCTATCATCAACAACTACGCTACAATCTGATGATCACAAGGATATGATGATAATGTATGGTCTCTTGTACGATTCTGTTGAACTTGATCATGACTTCCTTCACCCTTTTCATGGGTTTCAATTATAG | 843 | 0.3903 | MNVRDEAMKELMKGQEFAKQLGQVVLEVMKNNKNMNHLGATQQLVSKVVNSFTNTLFLLNKHHQRKEEEDFSFIIKSEEDSQDSCKTTTSAGGGGGGGRGSNKRRKTTETYEEVSERPTDDGHEWRKYGQKTILNSKYSRELKRSLPCIRPPITYGHHTCNKNNIIFEPTSPHDPSSILLSFNNTFPTPTKQDCPFLSIPSSSSSSSFNSSPSLDEYLLSPEPILDNSISTTHVNVSSTLSSTTTLQSDDHKDMMIMYGLLYDSVELDHDFLHPFHGFQL* | 281 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal5g0020 | 280 | Gene3D | WRKY domain | 102 | 165 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mal5g0020 | 280 | MobiDBLite | consensus disorder prediction | 102 | 124 | - | - | |
Mal5g0020 | 280 | MobiDBLite | consensus disorder prediction | 82 | 124 | - | - | |
Mal5g0020 | 280 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 5 | 144 | - | - | |
Mal5g0020 | 280 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 154 | 271 | - | - | |
Mal5g0020 | 280 | SMART | WRKY_cls | 119 | 162 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mal5g0020 | 280 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 5 | 144 | IPR044810 | GO:0003700 | |
Mal5g0020 | 280 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 154 | 271 | IPR044810 | GO:0003700 | |
Mal5g0020 | 280 | SUPERFAMILY | WRKY DNA-binding domain | 116 | 141 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mal5g0020 | 280 | ProSiteProfiles | WRKY domain profile. | 114 | 189 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mal5g0020 | 280 | Pfam | WRKY DNA -binding domain | 120 | 141 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal5g0020 | Mal-Chr5 | 408535 | 409869 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal5g0020 | 3 | 193 | WRKY Transcription Factor Family | AT2G40750 | 27.459 | 3.96e-11 | 60.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Mal5g0020 | WRKY | 3.4e-06 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal5g0020 | - | - | cam:105852555 | 188.348 |