Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5083 ATGGCTTCAAATCACTTGTCAGCTACAAGCCGTGCAGGGGCAACAAATGACGCTTTATACAAGGAATTGTGGCATGCCTGCGCTGGACCCCTTGTCACTCTTCCTCGTGAAGGGGAGAGAGTTTATTACTTCCCTCAGGGTCACATGGAACAGCTCGAGGCATCTATGAATCAGGGATTAGAGCAGCAAATGCCTTCTTTTAATCTTCCTTCTAAAATATTATGTAAAGTGGTCAATATTCATCTTCGGGCGGAACCTGAAACAGATGAAGTATATGCACAAATAACTCTGCTACCTGAAACCGATCAAAGTGAAGTGACAAGCCCAGACGATCCTCTGCCTGAACCTCCAAGGTGTACAGTTCATTCATTTTGCAAGACACTTACGGCTTCTGACACTAGCACTCATGGAGGTTTCTCTGTTCTTCGAAGACATGCAGATGATTGTCTACCACCACTGGACATGACTCAACAGCCACCGTGGCAAGAATTGGTTGCAACTGATTTGCATGGAAATGAATGGCATTTTCGACATATTTTTCGCGGGCAACCCAGACGCCACTTACTGACCACTGGGTGGAGCGTCTTTGTCAGTTCCAAAAAGTTAGTGGCTGGTGACGCATTTATATTCTTAAGGGGTGAAAATGGTGAGCTGCGAGTTGGAGTCAGGAGGCTCATGAGACAGCAAAGCAATATGCCATCTTCTGTTATATCTAGTCACAGCATGCATCTTGGCGTTTTGGCCACTGCATCTCATGCCATTTCCACCGGAACATTGTTTTCTGTGTTTTACAAGCCCAGAACAAGCCGGTCAGAGTTTATTGTAAGTATTAACAAGTATCTTGAAGCTCGAAATCACAAACTTTCTGTTGGTATGCGATTCAAAATGAGGTTCGAGGGTGATGAAGTACCTGAAAGAAGGTTCAGTGGTACAATTGTGGGTGTTGAAGATAATAAATCGTCCGTCTGGGTTGATTCCGAGTGGCGATCATTAAAGGTTCAATGGGATGAACCGTCATCAATTGTGCGTCCAGATAGAGTTTCTCCATGGGAATTGGAGCCACTTGTATCTACCCCTCCTGCAAACTCCCAGCCAACCCAACGAAACAAAAGATCACGGCCTCCTATTCTACCTTCAACAATGACCGATTCTTCTCTGCAAGGCATATGGAAATCACCAGTTGACTCTCCACCTTTTCCTTATCGTGACCCTCAACATGGGCGAGACCTCTATCCATCACCAAGATTCAGTTCTACCGCGACTAGCTTTCTTGGTTTTGCTGGGAACAGCCCTGCTTCTAACAAGTCAATATATTGGTCTAGTAGATTGGAAAACTCTACAGAACCTTTTTCACCTGTAGCACTTAAAGAATCTGGAGAGAAGAGACAAGGCACTGGAAATGGCTGTAGGCTCTTTGGGATTCAGTTACTTGAGAATTCTAATGCAGAAGAAAGTCTGCAAACAGTTCCTTTGTCAGGAAGGGCATGTGATGATAGGTCTGTTCCGTCCTTGGATGCCGAGTCTGACCAACATTCTGAACCATCAAATGTTAATCGGTCTGATATTCCTTCAGTAAGTTGTGATGCTGACAAATCATGCCTGCGGTCTCCTCAGGAGTCACAAAGCAGACAAATAAGAAGCTGCACAAAGGTTCACATGCAAGGTATGGCTGTTGGAAGGGCTGTGGATTTAACACGTTTTGATGGATATGAGGATCTGCTTAGGAAATTGGAAGAGATGTTTGATATTGAGGGTGAGCTCTGTGGAGCAGCAAAAAAATGGCTGGTTGTTTACACTGACAATGAAGATGATATGATGATGGTTGGGGATGATCCGTGGCTTGAATTTTGTAGCGTTGTGAGGAAAATTTTCATCTACACACCAGAGGAGGTGAAGAAGCTTTCCCCTAAAAAAGGTCTTCCCACCAATGAAGAAGGTAAACCAAGCAAACTGGATTCCGAAGCAGTTGTCAATCCCGAGGATCAGTCATCAATTGTGGGGCCTGGTTGCTAG 2013 0.4476 MASNHLSATSRAGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTSPDDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERRFSGTIVGVEDNKSSVWVDSEWRSLKVQWDEPSSIVRPDRVSPWELEPLVSTPPANSQPTQRNKRSRPPILPSTMTDSSLQGIWKSPVDSPPFPYRDPQHGRDLYPSPRFSSTATSFLGFAGNSPASNKSIYWSSRLENSTEPFSPVALKESGEKRQGTGNGCRLFGIQLLENSNAEESLQTVPLSGRACDDRSVPSLDAESDQHSEPSNVNRSDIPSVSCDADKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGAAKKWLVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTPEEVKKLSPKKGLPTNEEGKPSKLDSEAVVNPEDQSSIVGPGC* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5083 670 MobiDBLite consensus disorder prediction 487 523 - -
Mal4g5083 670 Gene3D - 287 359 - -
Mal4g5083 670 SUPERFAMILY CAD & PB1 domains 548 623 - -
Mal4g5083 670 ProSiteProfiles B3 DNA-binding domain profile. 124 226 IPR003340 GO:0003677
Mal4g5083 670 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 632 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal4g5083 670 Pfam B3 DNA binding domain 124 224 IPR003340 GO:0003677
Mal4g5083 670 MobiDBLite consensus disorder prediction 352 406 - -
Mal4g5083 670 Gene3D - 541 635 - -
Mal4g5083 670 PANTHER AUXIN RESPONSE FACTOR 1 16 632 - -
Mal4g5083 670 MobiDBLite consensus disorder prediction 634 651 - -
Mal4g5083 670 CDD B3_DNA 122 224 IPR003340 GO:0003677
Mal4g5083 670 Pfam Auxin response factor 250 332 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal4g5083 670 MobiDBLite consensus disorder prediction 634 670 - -
Mal4g5083 670 Gene3D - 121 226 IPR015300 -
Mal4g5083 670 Pfam AUX/IAA family 543 636 IPR033389 -
Mal4g5083 670 SMART B3_2 124 226 IPR003340 GO:0003677
Mal4g5083 670 SUPERFAMILY DNA-binding pseudobarrel domain 113 253 IPR015300 -
Mal4g5083 670 MobiDBLite consensus disorder prediction 507 523 - -
Mal4g5083 670 ProSiteProfiles PB1 domain profile. 546 639 IPR000270 GO:0005515
Mal4g5083 670 MobiDBLite consensus disorder prediction 357 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5083 Mal-Chr4 131195544 131204783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5083 1 664 B3 DNA Binding Superfamily AT1G59750 71.257 0.0 950
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal4g5083 AUX_IAA 7.1e-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5083 K14486 - gmx:100793224 1231.08