Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5078 ATGTCTGAAGAGGCTGCTGGATCCATGTTGGTAGTTTATGATGATGATGATGATCCCTCTGACCAACATTCACTCTCTTTGGGAGGTGGATGCGGAGGCGGCGATACAAGCAGCACAGAAGACTCCCCTGCTCTCTCCTCCTTCCACTTGGAACCAACTCATCATCACATTCCTTACATTGGTCAAATGTTTCCCACTCATGATGCTGCTTATGACTTCTATACTGATTTTGCCAAGACCTGCGGCTTCTCTATTAGACGTCACCGTACTGAGGGAAAAGATGGTGTTGGCAAAGGACTTACTAGACGCTACTTTGTTTGTCACCGTGCTGGCAACACTCCTGCCAAATCATCAACCCAAACTAAACCTCAAAGAAATAGAAAATCTTCCAGATGCGGTTGTCAGGCTTACATGCGCATAAGCAAAACCACTGAATTTGGACCTCCCGAATGGCGCGTCACTGGTTTTGCCAACCACCATAATCATCAACTTTTGGAGCCAAACCAAGTTCGATTCCTTCCTGCATACAGAACTATATCAGATGCTGACAAAAATCGAATCCTTATGTTTGCCAAAACAGGGATTTCCGTTCATCAAATGATGAGGCTTATGGAGCTTGAGAAGTGCGTTGAACCTGGATATTTGCCTTTTACTGAGAAGGACGTAAGGAATTTACTCCAGTCGTTTAGAAAGTTAGATCCAGAAGAAGAAAGCCTAGATTTGTTAAGAATGTGCAGAAATATTAAGGACAAAGATCCTAATTTTAAATTTGAGTACACACTTGATGCAAACAACCGTTTAGAAAATATTGCCTGGTCATATGCCTCATCCATCCAATTGTATGATATCTTTGGTGATGCTGTGGTATTTGATACAACACATCGTCTCACTGCATTTGACATGCCGCTGGGGATATGGGTTGGAATAAATAATTATGGAATGCCCTGCTTCTTTGGCTGTGTGCTACTGCGAGATGAAACTGTCCGGTCATTTTCCTGGGCTATAAAGGCTTTCTTAGGTTTTATGAATGGGAAGGCTCCACAAACTATATTAACTGACCAAAACATTTGTCTCAAAGAAGCACTATCTGCAGAAATGCCGATAACAAAACATGCTTTCTGCATATGGATGATAGTAGCAAAGTTTCCATCTTGGTTCAATGCTGTTCTAGGAGAACGCTACAATGAGTGGAAGGCTGAATTTTATAGACTTTATAATCTTGAATCAGTTGAGGACTTTGAACTAGGCTGGAGGGAGATGGTCTGTTCTTTTGGGCTGCATTCAAATCGGCACGTGGTTAATTTATATAGCTCGCGCCCACTTTGGGCATTGCCATATTTAAGAAGCCATTTTCTTGCAGGAATGACTACAACTGGTCAGTCAAAGTCAATTAATGCCTTCATTCAACGGTTTCTAAGTGCACAGACACGACTTGCTCACTTTGTTGAACAGGTAGCTGTTGCTGTGGATTTTAAAGATCAAACTGGAGAACAACAAACCATGCAGCAGAATCTCCAAAATGTTTGCCTCAAAACAGGAGCTCCCATGGAATCGCATGCTGCAACGGTCCTCACTCCTTTTGCCTTTTCAAAGCTTCAAGAACAACTTGTGTTGGCTGCACATTATGCATCTTTCTCAGTCGAAGATGGTTTTCTTGTGAGACATCACACAAAAGTTGAAGGAGGTCGCAAAGTTTATTGGTCCCCTCAGGAAGGAATTATAAGTTGCAGCTGTCACCAGTTTGAATTTTCTGGAATTTTGTGTAGGCACTCTCTGAGAGTTCTTTCAACAGGAAATTGCTTTCAGATCCCAGATACATATCTTCCTATCCGATGGCGTCGAATCAGCGTTCCTTCTTCTAAGCTTCTTCTAAATGCACCCAGCGATCATGCCGAAAGAGTTAAGTTATTCCAAAATATGGTTTCATCTCTAATTACAGAATCTGCTAAGTCTAAAGAACGGTTAGATATTGCAACAGAACAAGTTTCCATTCTTCTGTCTCGCATAAGGGAGCAACCAATTTCATTACATTGTGCTAGAGATATTTCTACCATTAATAGGAATCTATGA 2070 0.4169 MSEEAAGSMLVVYDDDDDPSDQHSLSLGGGCGGGDTSSTEDSPALSSFHLEPTHHHIPYIGQMFPTHDAAYDFYTDFAKTCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPAKSSTQTKPQRNRKSSRCGCQAYMRISKTTEFGPPEWRVTGFANHHNHQLLEPNQVRFLPAYRTISDADKNRILMFAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEESLDLLRMCRNIKDKDPNFKFEYTLDANNRLENIAWSYASSIQLYDIFGDAVVFDTTHRLTAFDMPLGIWVGINNYGMPCFFGCVLLRDETVRSFSWAIKAFLGFMNGKAPQTILTDQNICLKEALSAEMPITKHAFCIWMIVAKFPSWFNAVLGERYNEWKAEFYRLYNLESVEDFELGWREMVCSFGLHSNRHVVNLYSSRPLWALPYLRSHFLAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNVCLKTGAPMESHAATVLTPFAFSKLQEQLVLAAHYASFSVEDGFLVRHHTKVEGGRKVYWSPQEGIISCSCHQFEFSGILCRHSLRVLSTGNCFQIPDTYLPIRWRRISVPSSKLLLNAPSDHAERVKLFQNMVSSLITESAKSKERLDIATEQVSILLSRIREQPISLHCARDISTINRNL* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5078 689 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 56 683 IPR031052 GO:0006355
Mal4g5078 689 ProSiteProfiles Zinc finger SWIM-type profile. 563 599 IPR007527 GO:0008270
Mal4g5078 689 Pfam FAR1 DNA-binding domain 72 165 IPR004330 -
Mal4g5078 689 Pfam MULE transposase domain 288 380 IPR018289 -
Mal4g5078 689 SMART 26again6 574 601 IPR006564 GO:0008270
Mal4g5078 689 MobiDBLite consensus disorder prediction 1 44 - -
Mal4g5078 689 Pfam SWIM zinc finger 569 597 IPR007527 GO:0008270
Mal4g5078 689 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 56 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5078 Mal-Chr4 131107440 131110145 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g5078 MULE 1.8e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5078 - - gmx:100810717 1258.82