Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5062 ATGATCCCCTTAACCTTAATTGTTATCACTCTGCTTTCTGTTCTGTTTTCCTCTGTTTTTGCTTCATCCTTGCTAAGTGATTTCCATGCTCTAGTCACACTTAGAGAAGGATTTCAATTCACAAACCCAGTTGTAAATACATGGAACACTTCCAATTTCAACTCAGTTTGTTCGTGGGCTGGAATTCAATGCCACCAGGGTCGAGTCGTGTCCGTAGACTTAACAGATTTGAATCTGTTTGGCTCTGTTTCACCTTCAATTTCATCACTTGATAAACTCACACACCTTTCCCTTGCAGGAAACAACTTCACTGGCATCATTCACATCACAAACTTAACCAACCTTCAGTTTCTAAACATTTCCAATAACCAGTTCAGTGGTCACATGAATTGGAACTACTCCACCATGGAAAACTTACAAGTTCTTGATGTCTACAACAATAACTTCACTTCCTTGCTTCCATTGGGTCTTCTTAGTTTGAAGAAAAACCTCAAACACTTGGATCTAGGTGGTAACTTTTTCTTTGGTGAAATCCCAAAAAGCTATGGAAAATTTGTTTCTCTTGAGTATCTTTCACTAGCTGGAAATGATATTAGTGGAAAAATCCCTGGTGAGTTGGGGAATTTAAGTAACTTGAGAGAGATTTACTTGGGCTATTACAATTCTTATGAAGGTGGAATTCCAGCGGAATTTGGAAAGTTAACAAATTTGGTTCACATGGATCTTTCAAGCTGTGATTTGGATGGTTCAATACCAAAAGAGTTAGGTAACTTGAAAGAGCTAAACACACTTTACTTGCATATAAACCAGCTTTCAGGTTCAATACCAAAACACCTTGGTAACTTAACAAACTTGCTCTACCTTGACCTTTCAAGCAATGCACTCACAGGTGAAATTCCAATTGAGTTCATCAACCTCAACCGCCTCACGCTTCTCAATCTTTTCTTGAACAGGTTACATGGTTCTATACCTGACTACATTGCAGATTTTCCTGATTTAGACACACTTGGCCTTTGGATGAACAACTTCACTGGTGAAATTCCATACAAACTTGGTCTTAATGGAAAGCTTCAACTACTTGACTTGTCCTCTAATAAGCTCACTGGTGTCATTCCACCTCATCTTTGTTCCTCAAATCAGCTTAAAATTTTGATTCTTCTCAATAATTTTCTCTTTGGACCTATACCTGAAGGTTTGGGAACATGTTACACTCTCATTAGAGTGAGATTAGGAGAGAATTACTTAAATGGTAGCATTCCAAATGGTTTTCTTTACCTTCCTAAGCTAAATTTAGCAGAGTTGAAAAACAATTACTTGTCAGGAACATTGTCTGAAAATGGTAATATTTCTTCTAAGCCTGTTAGTTTAGAACAACTTGATTTGTCAAACAATGCATTGTCTGGTCCTTTACCACACTCACTCTCAAATTTCACTTCCCTACAAATCCTTTTGCTTAGTGGAAACCAATTCTCAGGTCCAATTCCACCTTCCATTGGAGGACTAGATCAAGTGCTGAAACTCGACATTAGCACAAACTCATTATCCGGTGAAATTCCGCCCGAAATTGGTTACTGTGTTCATCTTACCTACCTTGACATGAGCCAGAACAATCTCTCAGGCTCTATTCCACCATTGATTTCCAACATCCGTATTTTGAATTACTTGAACTTGTCTAGAAATCATTTGAACCAAACCATTCCAAGATCAATAGGAACAATGAAAAGTCTCACAGTTGCTGATTTCTCCTTCAACGAATTCTCCGGTAAATTGCCAGAATCAGGTCAATTTTCATTCTTTAACGCCTCGTCATTCGCAGGAAATCCTAAACTATGTGGTTCTCTATTGAACAATCCATGTAAATTGACAAGAGTGAAATCTACATCAGGAAAAAATAATTCAGATTTCAAGCTGATATTCGCGCTTGGCCTATTGATATGTTCATTAGTATTTGCTGTTGCAGCCATTGTAAAGGCTAAGTCATTCAAAAAAAGTGGCCCTGGTTCTTGGAAGATGACTGCTTTTCAAAAGCTCGAATTCACAGTTTCCGATATCCTTGAATGCGTGAAAGATGGGAATGTTATTGGAAGAGGAGGTGCAGGGATAGTTTACCATGGAAAAATGCCAAATGGGGTGGAAATAGCAGTGAAGAAGCTACTTGGGTTTGGTGCAAATAGCCATGATCATGGTTTTAGAGCTGAAATTCAAACACTTGGAAACATAAGGCATAGAAACATAGTGAGGCTACTTGCATTTTGTTCAAACAAAGAAACAAATCTTCTTGTGTATGAATACATGAGAAATGGGAGCTTAGGTGAGACATTGCATGGGAAAAAAGGTGCGTTCTTGAGCTGGAACTTTAGGTACAAAATTTCTATTGATTCGGCGAAAGGACTCTGCTACCTTCACCATGATTGTTCTCCTTTGATCCTCCATAGAGACGTGAAATCCAATAACATTTTGTTGAGTTCAAATTTCGAAGCACATGTGGCTGATTTCGGGCTGGCAAAGTTCTTGGTCGATGGTGCTGCATCAGAGTGCATGTCCTCAATTGCAGGCTCCTATGGCTACATTGCACCAGAATATGCTTATACATTGAGGGTAGATGAAAAGAGTGATGTTTATAGTTTTGGAGTTGTTCTATTAGAGCTTCTAACAGGGAGGAAACCAGTGGGAGATTTTGGAGAAGGCGTGGATCTTGTACAATGGTGCAAGAAAGCAACAAATGGACGAAGAGAAGAGGTTGTCAACATAATTGATTCAAGACTCATGGTGGTGCCAAAAGAAGAAGCCATGCACATGTTCTTCATTGCAATGTTATGCTTAGAAGAGAACAGTGTACAAAGACCAACCATGAGGGAAGTTGTTCAGATGCTTTCTGAATTTCCAAGACAATCATCTGATCAACAATCTTCTTCTTCTCATCCACCAAACAAAAACTTAATTCAAAATCATAAATTACCTTGTCCTCCTACTTTTAAACAAGACCTTTTGGTTTAA 2997 0.3854 MIPLTLIVITLLSVLFSSVFASSLLSDFHALVTLREGFQFTNPVVNTWNTSNFNSVCSWAGIQCHQGRVVSVDLTDLNLFGSVSPSISSLDKLTHLSLAGNNFTGIIHITNLTNLQFLNISNNQFSGHMNWNYSTMENLQVLDVYNNNFTSLLPLGLLSLKKNLKHLDLGGNFFFGEIPKSYGKFVSLEYLSLAGNDISGKIPGELGNLSNLREIYLGYYNSYEGGIPAEFGKLTNLVHMDLSSCDLDGSIPKELGNLKELNTLYLHINQLSGSIPKHLGNLTNLLYLDLSSNALTGEIPIEFINLNRLTLLNLFLNRLHGSIPDYIADFPDLDTLGLWMNNFTGEIPYKLGLNGKLQLLDLSSNKLTGVIPPHLCSSNQLKILILLNNFLFGPIPEGLGTCYTLIRVRLGENYLNGSIPNGFLYLPKLNLAELKNNYLSGTLSENGNISSKPVSLEQLDLSNNALSGPLPHSLSNFTSLQILLLSGNQFSGPIPPSIGGLDQVLKLDISTNSLSGEIPPEIGYCVHLTYLDMSQNNLSGSIPPLISNIRILNYLNLSRNHLNQTIPRSIGTMKSLTVADFSFNEFSGKLPESGQFSFFNASSFAGNPKLCGSLLNNPCKLTRVKSTSGKNNSDFKLIFALGLLICSLVFAVAAIVKAKSFKKSGPGSWKMTAFQKLEFTVSDILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGANSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGETLHGKKGAFLSWNFRYKISIDSAKGLCYLHHDCSPLILHRDVKSNNILLSSNFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRKPVGDFGEGVDLVQWCKKATNGRREEVVNIIDSRLMVVPKEEAMHMFFIAMLCLEENSVQRPTMREVVQMLSEFPRQSSDQQSSSSHPPNKNLIQNHKLPCPPTFKQDLLV* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5062 998 Gene3D Ribonuclease Inhibitor 221 331 IPR032675 -
Mal4g5062 998 Pfam Leucine Rich Repeat 163 181 IPR001611 GO:0005515
Mal4g5062 998 Pfam Leucine Rich Repeat 356 376 IPR001611 GO:0005515
Mal4g5062 998 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Mal4g5062 998 SUPERFAMILY RNI-like 71 392 - -
Mal4g5062 998 SMART LRR_typ_2 549 573 IPR003591 -
Mal4g5062 998 SMART LRR_typ_2 136 159 IPR003591 -
Mal4g5062 998 SMART LRR_typ_2 90 112 IPR003591 -
Mal4g5062 998 SMART LRR_typ_2 282 306 IPR003591 -
Mal4g5062 998 SMART LRR_typ_2 234 258 IPR003591 -
Mal4g5062 998 SMART LRR_typ_2 185 209 IPR003591 -
Mal4g5062 998 SMART LRR_typ_2 477 501 IPR003591 -
Mal4g5062 998 SMART LRR_typ_2 355 378 IPR003591 -
Mal4g5062 998 MobiDBLite consensus disorder prediction 961 990 - -
Mal4g5062 998 PANTHER UNNAMED PRODUCT 5 967 - -
Mal4g5062 998 MobiDBLite consensus disorder prediction 961 980 - -
Mal4g5062 998 Gene3D Phosphorylase Kinase; domain 1 653 764 - -
Mal4g5062 998 ProSiteProfiles Protein kinase domain profile. 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g5062 998 Gene3D Transferase(Phosphotransferase) domain 1 765 984 - -
Mal4g5062 998 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 5 967 - -
Mal4g5062 998 SUPERFAMILY Protein kinase-like (PK-like) 677 958 IPR011009 -
Mal4g5062 998 ProSiteProfiles Leucine-rich repeat profile. 92 113 IPR001611 GO:0005515
Mal4g5062 998 SUPERFAMILY L domain-like 355 612 - -
Mal4g5062 998 Gene3D Ribonuclease Inhibitor 136 220 IPR032675 -
Mal4g5062 998 Gene3D Ribonuclease Inhibitor 332 622 IPR032675 -
Mal4g5062 998 ProSiteProfiles Leucine-rich repeat profile. 527 549 IPR001611 GO:0005515
Mal4g5062 998 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Mal4g5062 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Mal4g5062 998 ProSiteProfiles Leucine-rich repeat profile. 138 159 IPR001611 GO:0005515
Mal4g5062 998 SMART serkin_6 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g5062 998 Pfam Protein tyrosine and serine/threonine kinase 691 958 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5062 Mal-Chr4 130737539 130742104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5062 21 975 Receptor kinase-like Gene Family AT5G65700 57.143 0.0 1080
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal4g5062 PK_Tyr_Ser-Thr 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5062 - - qsu:112009585 1504.58