Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5049 ATGGAACTATCATCAGATTTACAAAACAACAAGCAGAAGAGAGGCACCACCACTCATCCCCACCACCAACATCAACAACAAGAATCCTCACCTTCAAATACTCATCAGCAACAATCCCAACACCTTGTGGTCCCTTTTGATGGAAGGCCATCATCTTTCATCATGGGCTCCATCTCCAATATTCAACCTTCTTCCAACTCTTCTCCCTCCAATTCATCTTCTTCTTCTGCATCCACTCAACACCTCATTGATGCTTCTCTCTCAATTGCAACCAGATCTGACCCTCCTCTTCCAGATGCATCCAACAACAACAACAATCAAATTCAACCATTTTCTTCATCCTCCACCGCCGTTGCAAATCCTCCCAAAAGATCCACTAAGGACAGGCACACAAAAGTTGACGGCCGTGGCCGGAGAATTCGAATGCCGGCGACATGTGCAGCCAGGGTTTTCCAATTGACCAGAGAATTAGGCCACAAATCCGATGGTGAAACAATTGAATGGCTTCTTCAACAAGCGGAGCCGGCGATCATCGCTGCCACCGGCACCGGAACAATCCCAGCCAATTTCTCAACACTCAACGTTTCACTCCGAAGTAGCGGCTCTACACTGTCGGCGCCGCCGTCGAAATCAGCTCCTCACAGTTTTCACGGCGCGCTTGCACTGGCTCATCATCCTTACGAAGAAGCTGCGTACCAACACGCGCCTCTGCTAGGGTTTCATCCTCATCAACAACAACAACAACTCATGAACGCTGATCAAATTGGTGAAGCGCTTTCGAACGAGAATTACATGAGAAAACGGTATAGAGAAGATCTTTTCAAAGATGATATCAACAATAGCAACAACCAAAATGAAAGTGGTGGTGATGGTGATGGTTCTTCTTCTCCCAAAGGTTTCAAAACAAATCACCAACAACAACAAGATGGTATGGGTGAAGGTGAAGGTGGTGGAGGAGGAGGAGGAGCTTCTTCATCCTCTTCTGCTGGTAATTCTTTTACCGGACTACTTCGACCGTCGAATATGTTACCGGCAACAGCCATGTGGGCTACGGCGGGGAGTGGAAGCACAATTTGGATGGTACCGGTGAGTGGTGGTGCTGCAACTTCCAATTCAGAGACACAGACACAAAACATGTGGCCTTTTAGTCCTCATGTTCAGTCTCAAAATCAAGGCAACGCTGCTGCTGCAACTCCGTCTCAGTTACATTTCATGCCGAGGTTTAATGTTCCAGCTACTGGTGGTGTTGAATTTCAAGGTGGACGTGGTGGTTTACAATTGGGTTCAGTGTATCAACAACCATCACAGCATTTGGGATTAGCAGTGTCTGATTCCAACTTGGTCTCACCCTCAACCTAA 1359 0.4724 MELSSDLQNNKQKRGTTTHPHHQHQQQESSPSNTHQQQSQHLVVPFDGRPSSFIMGSISNIQPSSNSSPSNSSSSSASTQHLIDASLSIATRSDPPLPDASNNNNNQIQPFSSSSTAVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHSFHGALALAHHPYEEAAYQHAPLLGFHPHQQQQQLMNADQIGEALSNENYMRKRYREDLFKDDINNSNNQNESGGDGDGSSSPKGFKTNHQQQQDGMGEGEGGGGGGGASSSSSAGNSFTGLLRPSNMLPATAMWATAGSGSTIWMVPVSGGAATSNSETQTQNMWPFSPHVQSQNQGNAAAATPSQLHFMPRFNVPATGGVEFQGGRGGLQLGSVYQQPSQHLGLAVSDSNLVSPST* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5049 452 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 447 IPR005333 GO:0003700
Mal4g5049 452 MobiDBLite consensus disorder prediction 53 87 - -
Mal4g5049 452 PANTHER TRANSCRIPTION FACTOR TCP8 23 447 - -
Mal4g5049 452 MobiDBLite consensus disorder prediction 277 335 - -
Mal4g5049 452 MobiDBLite consensus disorder prediction 1 138 - -
Mal4g5049 452 MobiDBLite consensus disorder prediction 95 122 - -
Mal4g5049 452 MobiDBLite consensus disorder prediction 22 45 - -
Mal4g5049 452 Pfam TCP family transcription factor 125 271 IPR017887 -
Mal4g5049 452 ProSiteProfiles TCP domain profile. 126 180 IPR017887 -
Mal4g5049 452 MobiDBLite consensus disorder prediction 321 335 - -
Mal4g5049 452 MobiDBLite consensus disorder prediction 123 138 - -
Mal4g5049 452 MobiDBLite consensus disorder prediction 278 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5049 Mal-Chr4 130532479 130533959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5049 123 384 TCP Transcription Factor Family AT1G35560 48.881 1.00e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal4g5049 TCP 5.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5049 - - jre:109002313 414.461