Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5048 ATGGAGACTCACTATAATCACACTCTCTTCGAGAGACGCCCCTTTCTCAAATCCAAGGCTCCCGCAGTTAAATGGGTCAAACAATGGGTTCCACAAGATGTTGTTGCCACTGGTGGGAAGTGTATGCTCTTAAGATGGGTAACAGAGGATACCATAAAGGCCTTGAAAGAAAAGGAAAAAGAACCATTAGCTCCTGAGCCAGAACCCGAGCCAACTACTGAAGTACTTTTTCTTTGCAGCTATGAAGGCTGTGGAAAGACATTTATAGATGCTGGTGCTTTGAGGAAGCATTCTCACATCCATGGAGAGAGGCAATTTGTTTGCCATTACGAGGGGTGTGGAAAGAAATTTCTGGACAGTTCAAAGTTAAAAAGACATTTCTTAATTCATACGGGGGAGAGGGATTTTGTGTGTACTTATGAAGGCTGTGGTAAGCTTCAGCTGCAAGGTAATGAGGCCTTCTCCTTGGATTTTAACCTGAGGTCTCACATGAAGACACATTCACAAGAGAACTATCATATATGCCCATACGCGGATTGTGGGAAGAGATACGCTCATGAATACAAGCTAAAGAATCACATTGCTTCCCATCATGAAAAGAGTACACCAATAGATGTGCCAATAAAGTATGCCACTCCTCCTTCAGAAAAGCAAACAAAAAGTGCTAGACCTTCTGGGGCAACATACGGTTCGGCATCCTCTGATCGTCCATATGCATGTCCTTATGAAGGGTGTGAAAAAGCTTACATTCACGAGTACAAGCTTAAACTGCATTTGAAGAGGGAGCATCCTGGCCACATAATTGATGAAAATGCCATGCATGCTCTGGCTAATAATGCTGAAAATGAAATGGATGAAGCAAGTGATCACGATGCTTATGGTGGAAAACGTTCCAATGGTAAAAGTCAGAAGCAAAGTAGGCCCAAGCCAAACTTGAAAATGCCTCCTTCCAAAGTTGCTCAGCGGAAAGGGTCTACTCCAACCCCTTCCACTTTTAATATGGTTAAAAAACCTTGGCCAGTGAAAGAAGAAACTTACGATGAAGACAGCGAAGAAACTGAGGAGGATCGCGACAATGTTGAAGATGGTTGGAGATATGCTGGAAACAACGAAGATGATGATGAGGAAACAGAATATGAAGACTGA 1146 0.4293 METHYNHTLFERRPFLKSKAPAVKWVKQWVPQDVVATGGKCMLLRWVTEDTIKALKEKEKEPLAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQFVCHYEGCGKKFLDSSKLKRHFLIHTGERDFVCTYEGCGKLQLQGNEAFSLDFNLRSHMKTHSQENYHICPYADCGKRYAHEYKLKNHIASHHEKSTPIDVPIKYATPPSEKQTKSARPSGATYGSASSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHIIDENAMHALANNAENEMDEASDHDAYGGKRSNGKSQKQSRPKPNLKMPPSKVAQRKGSTPTPSTFNMVKKPWPVKEETYDEDSEETEEDRDNVEDGWRYAGNNEDDDEETEYED* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5048 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 135 IPR013087 -
Mal4g5048 381 PANTHER BNAA03G13270D PROTEIN 4 380 - -
Mal4g5048 381 Gene3D Classic Zinc Finger 173 202 - -
Mal4g5048 381 Gene3D Classic Zinc Finger 103 131 - -
Mal4g5048 381 MobiDBLite consensus disorder prediction 283 297 - -
Mal4g5048 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 106 IPR013087 -
Mal4g5048 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 173 203 IPR013087 -
Mal4g5048 381 MobiDBLite consensus disorder prediction 205 235 - -
Mal4g5048 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 238 268 IPR013087 -
Mal4g5048 381 MobiDBLite consensus disorder prediction 283 381 - -
Mal4g5048 381 MobiDBLite consensus disorder prediction 214 232 - -
Mal4g5048 381 SUPERFAMILY beta-beta-alpha zinc fingers 101 143 IPR036236 -
Mal4g5048 381 SUPERFAMILY beta-beta-alpha zinc fingers 78 102 IPR036236 -
Mal4g5048 381 SUPERFAMILY beta-beta-alpha zinc fingers 153 199 IPR036236 -
Mal4g5048 381 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
Mal4g5048 381 Pfam Zinc finger, C2H2 type 173 197 IPR013087 -
Mal4g5048 381 Gene3D Classic Zinc Finger 77 102 - -
Mal4g5048 381 ProSitePatterns Zinc finger C2H2 type domain signature. 108 130 IPR013087 -
Mal4g5048 381 Gene3D Classic Zinc Finger 212 282 - -
Mal4g5048 381 Gene3D Classic Zinc Finger 132 172 - -
Mal4g5048 381 SUPERFAMILY beta-beta-alpha zinc fingers 233 261 IPR036236 -
Mal4g5048 381 SMART c2h2final6 173 197 IPR013087 -
Mal4g5048 381 SMART c2h2final6 136 167 IPR013087 -
Mal4g5048 381 SMART c2h2final6 77 101 IPR013087 -
Mal4g5048 381 SMART c2h2final6 238 263 IPR013087 -
Mal4g5048 381 SMART c2h2final6 106 130 IPR013087 -
Mal4g5048 381 ProSitePatterns Zinc finger C2H2 type domain signature. 240 263 IPR013087 -
Mal4g5048 381 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 4 380 - -
Mal4g5048 381 ProSitePatterns Zinc finger C2H2 type domain signature. 175 198 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5048 10 367 C2H2 Transcription Factor Family AT4G06634 66.846 9.76e-152 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g5048 zf-C2H2 0.0084 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5048 - - zju:107412546 613.609