Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5039 ATGGAGAAATACGAGGTGGTTAAGGATATAGGATCTGGAAATTTTGGAGTTGCTAGACTCATGCGCCACAAAGATACCAAACAACTCGTTGCCATGAAATTCATCGAACGAGGTCACAAGATTGATGAGAATGTTGCAAGGGAAATAATAAACCATAGAAGTCTTCGCCATCCTAATATTATTCGTTTCAAAGAGGTGGTTTTGACTCCTACGCATCTTGGTATAGTTATGGAGTATGCTGCTGGTGGAGAGCTTTTTGAGCGAATTTGCTCTGCTGGAAGATTCAGTGAAGATGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGTCATTCCATGCAAATCTGCCATCGAGACTTGAAGCTCGAGAACACCTTATTGGATGGCAGCCCTGCCCCACGGCTCAAAATTTGCGATTTTGGTTATTCTAAGTCATCTCTCCTTCACTCTAGGCCTAAGTCAACGGTGGGAACTCCAGCCTACATAGCACCTGAGGTTCTTTCACGTAGAGAATATGACGGGAAGTTGGCAGATGTATGGTCTTGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAGGACCAAGATGATCCCAAAAATTTCAGGAAAACCATCAATAGAATTATGGCTGTTCAATACAAGATTCCAGATTACGTTCACATATCTCAAGAATGTAGACATCTGCTGTCTCGCATTTTTGTGGCAAGTCCAGCTAGGAGAATCACCATTAAGGAAATCAAGTCCCATCCATGGTTTTTAAAGAACTTGCCTAGAGAATTGACCGAAATGGCTCAAGCTGTTTACTACAAAAAAGAAAATCCAACTTATTCTCTTCAGAGCATTGAAGACATTATGAATATTGTTGAGGAAGCTAAAAACCCACCTCAGGCATCTAGGTCAATTGGAGGGTTTGGCTGGGGAGGAGAAGAAGATGACGACGAAACAAATGAAGAAGCAGAAGCCGAGCCGGAAGAAGATGAGTATGAAAAGAGAGTCAAAGAGGCTCAGGAAAGCGGAGAAGTCCATGTCAGTTAA 1059 0.4278 MEKYEVVKDIGSGNFGVARLMRHKDTKQLVAMKFIERGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLGIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTINRIMAVQYKIPDYVHISQECRHLLSRIFVASPARRITIKEIKSHPWFLKNLPRELTEMAQAVYYKKENPTYSLQSIEDIMNIVEEAKNPPQASRSIGGFGWGGEEDDDETNEEAEAEPEEDEYEKRVKEAQESGEVHVS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5039 352 MobiDBLite consensus disorder prediction 334 352 - -
Mal4g5039 352 SUPERFAMILY Protein kinase-like (PK-like) 1 303 IPR011009 -
Mal4g5039 352 MobiDBLite consensus disorder prediction 315 333 - -
Mal4g5039 352 PANTHER SERINE/THREONINE KINASE 2 346 - -
Mal4g5039 352 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Mal4g5039 352 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Mal4g5039 352 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mal4g5039 352 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g5039 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Mal4g5039 352 CDD STKc_SnRK2 3 259 - -
Mal4g5039 352 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g5039 352 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 346 - -
Mal4g5039 352 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g5039 352 MobiDBLite consensus disorder prediction 301 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5039 Mal-Chr4 130465589 130468535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5039 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 42.593 8.60e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mal4g5039 Pkinase 3.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5039 K14498 - gmx:100812259 639.802