Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5037 ATGTCTCAACAGCAACCATCGCGTGTGCACCCACAAATCTGGCAGACATGCACCGATGCTGCCATTCAAATTCCAAAGCTGCATTCTAGAGTTTACTATTTTCCGCAAGGCCACTTAGAATACGCTTCTTCTTCTTCTTCCTCCAATACTTCTCTTCTTCAAAGTTTTCGTCCTTTCACTATCTGTATCATCTCCGCCGTTGATCTCCTCGCCGATCCTAACACGGATGAGGTCTTCGTTAAACTGCTACTCACTCCAATAACCAACGACAACAACAATGTCTGTGTTCAAGAACCTCGTGATGAGGTTCCCAATTGCAATGACGTCGATGAGGTTGTTTCTTCGTTTACAAAGATTCTTACTCGGACTGATGTTTGCAATTTCCGTTCATTCTATATACCTCGGTTTTGCGCCGACAATGTCTTCCCGCCGCTTGACAAGGAGGCCAAAACCCCTTCTCAAAACCTCCTCATCACCGACGTTCATGGTGAAGTTTGGAAGTTTTACCATGTCTGCCGCGGGTCTCCCAGGAGAAACATATTATATATCTCTGAATGGAATTCTTTCGTTAACAAGAAGAAACTCGTCGAAGGAGATTCTGTTGTTTTCATGAGAAACTCAACGGGAAAGTTATTTGTTGGGATTCGCAGGACGGAGCAGAAAAAGAAGGCTGAGTTGGAGAAGGAGGTAATGGAAGCAGTGAAGTTGGCGGAAGAGAACAAAGCATTTGAAGTTGTTTATTATCCTAAGGGTAATGATTGGTGTGATTTTGTTGTGGATGGTAATGTTGTTGATGAATCAATGAAGATTCAATGGAATCGTCAAATGAGAGTTAAGATGAGGACTGATAATTCTTTAAGGATTCCATATCAAGGGACAATCTCTACAGTATCTCGTACTGCTAATTTATGGCGCATGCTTCAGGTTAATTGGGATGAATTTCAAATCTCACAAATTCCAAGGCGAGTCAGCCCGTGGTGGGTTGAACTTATTTCCGTCAAACCTGCACCAGGTCTATCAATCCCCCCAACTAAAAAACTTAGAACAGTTCAAAGTTCTGCCCCCTTAAGTGATGAAAAGGGATCCCCTTAA 1092 0.4286 MSQQQPSRVHPQIWQTCTDAAIQIPKLHSRVYYFPQGHLEYASSSSSSNTSLLQSFRPFTICIISAVDLLADPNTDEVFVKLLLTPITNDNNNVCVQEPRDEVPNCNDVDEVVSSFTKILTRTDVCNFRSFYIPRFCADNVFPPLDKEAKTPSQNLLITDVHGEVWKFYHVCRGSPRRNILYISEWNSFVNKKKLVEGDSVVFMRNSTGKLFVGIRRTEQKKKAELEKEVMEAVKLAEENKAFEVVYYPKGNDWCDFVVDGNVVDESMKIQWNRQMRVKMRTDNSLRIPYQGTISTVSRTANLWRMLQVNWDEFQISQIPRRVSPWWVELISVKPAPGLSIPPTKKLRTVQSSAPLSDEKGSP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5037 363 Gene3D - 113 218 IPR015300 -
Mal4g5037 363 CDD B3_DNA 115 217 IPR003340 GO:0003677
Mal4g5037 363 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 228 359 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal4g5037 363 SMART B3_2 116 219 IPR003340 GO:0003677
Mal4g5037 363 MobiDBLite consensus disorder prediction 342 363 - -
Mal4g5037 363 ProSiteProfiles B3 DNA-binding domain profile. 116 219 IPR003340 GO:0003677
Mal4g5037 363 MobiDBLite consensus disorder prediction 345 363 - -
Mal4g5037 363 Gene3D - 271 335 - -
Mal4g5037 363 Coils Coil 216 241 - -
Mal4g5037 363 Pfam Auxin response factor 233 305 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal4g5037 363 PANTHER AUXIN RESPONSE FACTOR 228 359 - -
Mal4g5037 363 PANTHER AUXIN RESPONSE FACTOR 5 221 - -
Mal4g5037 363 SUPERFAMILY DNA-binding pseudobarrel domain 114 218 IPR015300 -
Mal4g5037 363 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 5 221 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal4g5037 363 Pfam B3 DNA binding domain 116 218 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5037 Mal-Chr4 130451989 130453991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5037 8 361 B3 DNA Binding Superfamily AT1G77850 38.308 1.51e-80 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal4g5037 B3 7.9e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5037 - - mtr:MTR_2g006270 539.65