Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5027 ATGGAGAGCAATTTCAGTTCATATAATCCTCATGACTTAGCCTCTAGCTTGAAGAGAAAGCACCATCATGATGATGTTAAAGAAGATTATTATGCATCATCTTCATCTTTCAATCTAAGGAATGTTTCAAAGCTCATTCTTCCACCACTTGGTGTTTCAAAACAGAATCCAGTGTGCTCAAAAGGATGGATCATATCCCCAATGGATTCTAGATACAGGTGTTGGGAGAGTTTTATGGTTGTTTTGGTAGCTTATTCTGCATGGGTCTATCCTTTTGAAGTTGCTTTCATGCACTCTTCTCCAAATAGAAAACTCTATATTGTGGACAATATTGTTGATCTTTTCTTCGCTGTTGATATTGTTTTGACATTCTTCGTTGCATACGTAGATGGAACAACTCATCTTTTTGTTCGAGATTCCAAAAAAATTGTTGTCAGGTACTTGACAACATGGTTCGTAATGGATGTGGCATCAACTGTACCATATGAAGCAATAGGCTATATTTTAACTGGCAAACACAAATTGGGTATCCCTTACTACCTCTTAGGAATGCTCAGATTTTGGAGAATCAGACGTGTCAAGCAATTCTTCACAAGGCTTGAGAAAGACATCAGGTTCAGCTACTTCTGGGTCAGATGTGCTAGGCTTCTTTCTGTAACACTTTTTTCAGTTCATTGTGCTGGGTGCCTCTATTACATGCTAGCTGATATGTACCCTCATGAAGGAAAGACATGGATTGGAGCTGTGATTCCAAACTTCAGAGAGACAAGTACTAGGGTTAGATATATTTCAGCAATTTATTGGTCCATCACTACCATGACAACTGTTGGTTATGGTGACCTTCATGCTGTCAACACCATGGAAATGATTTTCATTATTTTCTACATGCTCTTCAACCTTGGCCTAACTGCTTACTTGATTGGTAACATGACAAATCTTGTTGTTGAAGGAACTCGCCGCACCATGGAATTTAGAAATAGCATTGAAGCAGCTTCAAACTTTGTGTGCCGAAATCGGTTGCCTCCAAGGTTAAAAGAGCAGATCCTGGCTTACATGTGTTTGAGATTTAAGGCAGAGAGCTTGAATCAACATCAACTAATTGAACAGCTACCAAAGTCAATTTGCAAAGGCATTTGCCAGCATTTGTTTTTTCCAACTGTAGAGAAAGTCTATCTCTTCAATGGCGTCTCAAAAGAAATCCTTTTGTCCCTAGTTGCAAAAATGAAGGCAGAATACATACCACCTAAAGAGGATGTTATCATGCAAAATGAATCACCAGATGATGTTTACATTATAGTGTCAGGAGAAGTAGAGATCATTGATAGTGTTATAGAGAAAGAGAGAATTTTAGGCACTCTAACAACAGGAGACATGTTTGGAGAAGTTGGCGCGCTTTGTTGTAGGCCTCAGAGTTTTACATACAGAACCAAGACCCTTACACAGCTTCTTAGGCTGAAAACCAATAATCTTATAGAAGCAATGCAGATTAAAAAAGAAGACAATATACTAATACTCAAAAATTTCCTTCAGCATTTCAAGCAGCTTAAGGATTTGAGTATCAAAGACTTAATGGTGGAGAATGTCGAGGAAGATGATCCTAACATGGCTGTGAATTTGTTAACTGTGGCCAGCACAGGCAATGCGGCTTTTCTCGAGGAGCTTCTAAGAGCTGGTTTGGATCCTGACATTGGAGACTCAAAAGGAAAAACTCCTTTGCATATAGCAGCATCAAATGGGCATGAAGAGTGTGTTAAAGTCTTGCTCAAGCATACATGCAACATACATATAAAAGATATGAACGGTAACACTGCACTATGGTATGCTATAGAATCAAAACATTACTCAATATTCAGGATCCTCTATCAGCTATCTGCTCTTTCTGATCCATACACAGCAGGCAATCTCCTATGTCTAGCAGCAAAAAGAAATGATTTAACAGTGACGAATGAGCTTTTAAAGCAAGGATTAAACATCGACTCCAAAGATCGACAAGGCACGACAGCTATCCAAATTGCCATGACAGAAAATCTTGTGGACATGGTTCAGTTGCTTGTCATGAACGGCGCAGACGTTGCTGAAGTACATGTTCATGAATTTTCTGCATCCACCTTAAATGAAATGCTGCAGAAACGCGAAATCGGACATCTAATTAATGTGAGTGAGGCCATGCCTAGTGAGTTTGTATTAAAGGGTAAAAATCAAGAAGAACAGAAGAAGATTTGGGGAAGATATAATGGACTAGAGTGTCCAAGAGTAAGCATATATAGAGGTCACCCTGTAGTGAGAAGAGAAAAAGGTTTCATTGAAGCTGGAAAGTTAATAAGGTTGCCTGATTCATTAGAGAAGCTCAAAATTATAGCAGGTGAAAAATTTGGGTTTGATGCAAAAGATGCAATGATGACAAATGAAGAAGGAGCAGAAATAGATTGTATTGATGTAATCAGAGATAATGACAAACTTTTTTTTGTTGAAGAGACTATTGATGCATAA 2490 0.3843 MESNFSSYNPHDLASSLKRKHHHDDVKEDYYASSSSFNLRNVSKLILPPLGVSKQNPVCSKGWIISPMDSRYRCWESFMVVLVAYSAWVYPFEVAFMHSSPNRKLYIVDNIVDLFFAVDIVLTFFVAYVDGTTHLFVRDSKKIVVRYLTTWFVMDVASTVPYEAIGYILTGKHKLGIPYYLLGMLRFWRIRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFSVHCAGCLYYMLADMYPHEGKTWIGAVIPNFRETSTRVRYISAIYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHQLIEQLPKSICKGICQHLFFPTVEKVYLFNGVSKEILLSLVAKMKAEYIPPKEDVIMQNESPDDVYIIVSGEVEIIDSVIEKERILGTLTTGDMFGEVGALCCRPQSFTYRTKTLTQLLRLKTNNLIEAMQIKKEDNILILKNFLQHFKQLKDLSIKDLMVENVEEDDPNMAVNLLTVASTGNAAFLEELLRAGLDPDIGDSKGKTPLHIAASNGHEECVKVLLKHTCNIHIKDMNGNTALWYAIESKHYSIFRILYQLSALSDPYTAGNLLCLAAKRNDLTVTNELLKQGLNIDSKDRQGTTAIQIAMTENLVDMVQLLVMNGADVAEVHVHEFSASTLNEMLQKREIGHLINVSEAMPSEFVLKGKNQEEQKKIWGRYNGLECPRVSIYRGHPVVRREKGFIEAGKLIRLPDSLEKLKIIAGEKFGFDAKDAMMTNEEGAEIDCIDVIRDNDKLFFVEETIDA* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5027 829 Pfam KHA, dimerisation domain of potassium ion channel 750 822 IPR021789 -
Mal4g5027 829 Pfam Ion transport protein 73 321 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal4g5027 829 Gene3D - 73 315 - -
Mal4g5027 829 SUPERFAMILY cAMP-binding domain-like 319 510 IPR018490 -
Mal4g5027 829 Pfam Cyclic nucleotide-binding domain 412 495 IPR000595 -
Mal4g5027 829 Gene3D Jelly Rolls 359 533 IPR014710 -
Mal4g5027 829 Pfam Ankyrin repeats (3 copies) 543 622 IPR002110 GO:0005515
Mal4g5027 829 ProSiteProfiles Ankyrin repeat region circular profile. 567 598 - -
Mal4g5027 829 Gene3D - 536 718 IPR036770 -
Mal4g5027 829 PRINTS Ankyrin repeat signature 568 583 IPR002110 GO:0005515
Mal4g5027 829 PRINTS Ankyrin repeat signature 680 694 IPR002110 GO:0005515
Mal4g5027 829 ProSiteProfiles Ankyrin repeat region circular profile. 664 691 - -
Mal4g5027 829 SMART ANK_2a 631 660 IPR002110 GO:0005515
Mal4g5027 829 SMART ANK_2a 534 563 IPR002110 GO:0005515
Mal4g5027 829 SMART ANK_2a 664 693 IPR002110 GO:0005515
Mal4g5027 829 SMART ANK_2a 567 596 IPR002110 GO:0005515
Mal4g5027 829 SMART ANK_2a 600 630 IPR002110 GO:0005515
Mal4g5027 829 ProSiteProfiles cAMP/cGMP binding motif profile. 392 511 IPR000595 -
Mal4g5027 829 CDD CAP_ED 392 495 IPR000595 -
Mal4g5027 829 PRINTS EAG/ELK/ERG potassium channel family signature 109 119 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g5027 829 PRINTS EAG/ELK/ERG potassium channel family signature 120 129 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g5027 829 PRINTS EAG/ELK/ERG potassium channel family signature 288 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g5027 829 PRINTS EAG/ELK/ERG potassium channel family signature 262 279 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g5027 829 PRINTS EAG/ELK/ERG potassium channel family signature 306 315 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g5027 829 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 36 826 - -
Mal4g5027 829 ProSiteProfiles KHA domain profile. 751 829 IPR021789 -
Mal4g5027 829 MobiDBLite consensus disorder prediction 1 20 - -
Mal4g5027 829 SUPERFAMILY Ankyrin repeat 530 702 IPR036770 -
Mal4g5027 829 SUPERFAMILY Voltage-gated potassium channels 67 315 - -
Mal4g5027 829 PANTHER POTASSIUM CHANNEL AKT1 36 826 IPR045319 GO:0005249|GO:0006813
Mal4g5027 829 ProSiteProfiles Ankyrin repeat profile. 664 696 IPR002110 GO:0005515
Mal4g5027 829 ProSiteProfiles Ankyrin repeat profile. 567 599 IPR002110 GO:0005515
Mal4g5027 829 SMART cnmp_10 392 509 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5027 Mal-Chr4 130320037 130327487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5027 17 572 Ion Channels AT4G22200 73.488 0.0 858