Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5019 ATGTTGCTTGATGGTACTAAGTTTGATTCCAGCAGAGATAGAGGAACTCCTTTCAATTTTAGGCTTGAACAAGATTGTATCACCTCACTGATGAAGAAACTGAATCGTTGCTTTCGATGCATAACCGAGAAAAGTGATGTATACAGCTATGGTATTGTTGTACTAGAAGTACTAACAGAGAAGCAACCAATTGATCCAACAATACCAAATGGACTTTTCATTATTGATTGGGTTAGACAGAAAAGAGGTGGAGTTGAAGTGTTAGATGAAAGCTTAAGAGCAAGGCCAGAATCTGAAATTGACGAAATGTTGCAGATTTTAAGTGTTGATTTGTTATGTGTAACTTCAAACCCTGATGGTAGACCAGCAATGAATGATGTGGTTGCATTGATGTGTAATGTGACTAGGAAACTAGAATTTTCTTAG 426 0.3685 MLLDGTKFDSSRDRGTPFNFRLEQDCITSLMKKLNRCFRCITEKSDVYSYGIVVLEVLTEKQPIDPTIPNGLFIIDWVRQKRGGVEVLDESLRARPESEIDEMLQILSVDLLCVTSNPDGRPAMNDVVALMCNVTRKLEFS* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5019 141 Gene3D Transferase(Phosphotransferase) domain 1 6 140 - -
Mal4g5019 141 Pfam Protein tyrosine and serine/threonine kinase 40 129 IPR001245 GO:0004672|GO:0006468
Mal4g5019 141 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 41 139 - -
Mal4g5019 141 SUPERFAMILY Protein kinase-like (PK-like) 40 132 IPR011009 -
Mal4g5019 141 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 41 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5019 Mal-Chr4 130162994 130163544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5019 41 131 Receptor kinase-like Gene Family AT5G56040 50.526 3.98e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal4g5019 PK_Tyr_Ser-Thr 3.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5019 - - gmx:100794698 156.377