Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5010 ATGAGAAGTAACAGATCCCGAGAGTTGGAATGTGCAGGATCCGTGAAGGGATTTCCAAAGGATTTTGACAAAGCAAAGGCTCAGACTGTTGCAGATGCACTTGCAAAAACAGGTCTCTCTGAATGTTATCATCCACAAGATTATCTCAATTTTTACTACCTTGGAAAGAGAGAACCTCATTCGTGCGAAAGTCCATCAACACAAAATCAATCATCTGAAAATTGTGCCTTGGTATCAGTTAAAAAGTTCAGGCGTTTTATGATTTATGTTCATGCTAAAGGAATGATAGTTGATGATGGATATGTAATAATTGGATCAGCAAATATTAATCATAGATCAATGGATGGATCAAGGGACACAGAAATAGCCATGGGGGGCTTATCAACCAAAATATACATTAGCAGAAAAGAAATCTCTTCCACGTGGCCAGGTGTATGGATACGAATGTCACTTTGGGCTGACCACCTTGGTGTTGATGTTAGCAAAAATGGAAAAATCAGTACACAAGATGGTCAAGAGTCTTTTCCTGATGTTGGTGGCAAAATTCTTGGATCACAAAATTCACTTCCGGATGCACTAACCACGTGA 588 0.3929 MRSNRSRELECAGSVKGFPKDFDKAKAQTVADALAKTGLSECYHPQDYLNFYYLGKREPHSCESPSTQNQSSENCALVSVKKFRRFMIYVHAKGMIVDDGYVIIGSANINHRSMDGSRDTEIAMGGLSTKIYISRKEISSTWPGVWIRMSLWADHLGVDVSKNGKISTQDGQESFPDVGGKILGSQNSLPDALTT* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5010 195 Pfam PLD-like domain 78 122 IPR025202 -
Mal4g5010 195 PANTHER PHOSPHOLIPASE D 28 158 - -
Mal4g5010 195 PANTHER PHOSPHOLIPASE D 158 195 - -
Mal4g5010 195 Gene3D Endonuclease Chain A 43 133 - -
Mal4g5010 195 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 86 113 IPR001736 GO:0003824
Mal4g5010 195 PANTHER PHOSPHOLIPASE D 28 158 IPR015679 -
Mal4g5010 195 SUPERFAMILY Phospholipase D/nuclease 82 123 - -
Mal4g5010 195 MobiDBLite consensus disorder prediction 167 195 - -
Mal4g5010 195 PANTHER PHOSPHOLIPASE D 158 195 IPR015679 -
Mal4g5010 195 SMART pld_4 86 113 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5010 Mal-Chr4 129978123 129979723 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5010 29 194 Phospholipase D Gene Family (Wang group) AT4G00240 38.679 8.33e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5010 K01115 - gmx:100779740 196.823