Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5007 ATGAGAAGTAACAGATCCCGAGAGTTGGAATGTGCAGGATCCGTGAAGGGATTTCCAAAGGATTTTGACAAAGCAAAGGCTCAGACTGTTGCAGATGCACTTGCAAAAACAGGTCTCTCTGAATGTTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAAGAGAGAACCTCATTCGTGCGAAAGTCCATCAACACAAAATCAATCATCTGAAAATCGTGCCTTGGTATCAGTTAAAAAGTTCAGGCGTTTTATGATTTATGTTCATGCTAAAGGAATGATAGTTGATGATGGATATGTAATAATTGGATCAGCAAATATTAATCAGAGATCAATGGATGGATCAAGGGACACAGAAATAGCCATGGGGGGCTTATCAACCAAAATATACATTAGCAGAAAAGAAATCTCTTCCACGTGGCCAGGTGTATGGATACGAATGTCACTTTGGGCTGACCACCTTGGTGTTGATGTTAGCAAAAATGGAAAAATCAGTACACAAGATGGTCAAGAGTCTTTTCCTGATGTTGGTGGCAAAATTCTTGGATCACAAAATTCACTTCCGGATGCACTAACCACGTGA 588 0.398 MRSNRSRELECAGSVKGFPKDFDKAKAQTVADALAKTGLSECYHPQDYLNFYCLGKREPHSCESPSTQNQSSENRALVSVKKFRRFMIYVHAKGMIVDDGYVIIGSANINQRSMDGSRDTEIAMGGLSTKIYISRKEISSTWPGVWIRMSLWADHLGVDVSKNGKISTQDGQESFPDVGGKILGSQNSLPDALTT* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5007 195 PANTHER PHOSPHOLIPASE D 158 195 IPR015679 -
Mal4g5007 195 MobiDBLite consensus disorder prediction 165 195 - -
Mal4g5007 195 PANTHER PHOSPHOLIPASE D 28 158 - -
Mal4g5007 195 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 86 113 IPR001736 GO:0003824
Mal4g5007 195 PANTHER PHOSPHOLIPASE D 158 195 - -
Mal4g5007 195 SUPERFAMILY Phospholipase D/nuclease 76 123 - -
Mal4g5007 195 Pfam PLD-like domain 74 122 IPR025202 -
Mal4g5007 195 Gene3D Endonuclease Chain A 52 133 - -
Mal4g5007 195 PANTHER PHOSPHOLIPASE D 28 158 IPR015679 -
Mal4g5007 195 SMART pld_4 86 113 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5007 Mal-Chr4 129967103 129968701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5007 29 194 Phospholipase D Gene Family (Wang group) AT4G00240 39.623 4.39e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5007 K01115 - gmx:100779740 206.068