Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5006 ATGCAGACTGTTGCAGATGCACTTGCAAAAACAGGTCTCTCTGAATGTTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAAGAGAGAACCTCATTCGTGCGAAAGTCCATCAACACAAAATCAATCATCTGAAAATCGTGCCTTGGTATCAGTTAAAAAGTTCAGGCGTTTTATGATTTATGTTCATGCTAAAGGAATGATAGTTGATGATGGATATGTAATAATTGGATCAGCAAATATTAATCAGAGATCAATGGATGGATCAAGGGACACAGAAATAGCCATGGGGGGCTTATCAACCAAAATATACATTAGCAGAAAAGAAATCTCTTCCACGTGGCCAGGTGTATGGATACGAATGTCACTTTGGGCTGACCACCTTGGTGTTGATGTTAGCAAAAATGGAAAAATCAGTACACAAGATGGTCAAGAGTCTTTTCCTGATGTTGGTGGCAAAATTCTTGGATCACAAAATTCACTTCCGGATGCACTAACCACGTGA 510 0.3902 MQTVADALAKTGLSECYHPQDYLNFYCLGKREPHSCESPSTQNQSSENRALVSVKKFRRFMIYVHAKGMIVDDGYVIIGSANINQRSMDGSRDTEIAMGGLSTKIYISRKEISSTWPGVWIRMSLWADHLGVDVSKNGKISTQDGQESFPDVGGKILGSQNSLPDALTT* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5006 169 SUPERFAMILY Phospholipase D/nuclease 51 98 - -
Mal4g5006 169 SMART pld_4 60 87 IPR001736 GO:0003824
Mal4g5006 169 MobiDBLite consensus disorder prediction 139 169 - -
Mal4g5006 169 PANTHER PHOSPHOLIPASE D 132 169 - -
Mal4g5006 169 PANTHER PHOSPHOLIPASE D 2 132 - -
Mal4g5006 169 Pfam PLD-like domain 48 96 IPR025202 -
Mal4g5006 169 Gene3D Endonuclease Chain A 29 109 - -
Mal4g5006 169 PANTHER PHOSPHOLIPASE D 132 169 IPR015679 -
Mal4g5006 169 PANTHER PHOSPHOLIPASE D 2 132 IPR015679 -
Mal4g5006 169 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 60 87 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5006 Mal-Chr4 129955863 129956946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5006 3 168 Phospholipase D Gene Family (Wang group) AT4G00240 39.623 1.58e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5006 K01115 - gmx:100779740 206.068