Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g5005 ATGAAGATTTTTATGATGTTTCTGTTTATGTTTCTAACCATGAACATGTTGATGAGTTTGAGGAATATTTCAGCAGCTCCTACTCCTTCTCCATCTTCTTCATCAGCATGTCCTATGGACCTTAACTATGTCCTTAGAATCCATTGGAACTCTTCTGCTTGTCAAAATTTCAAGTCTTTATCATCCAAAGAAACTAACACTTGTTGTGCATCAGTTTTGTCTCTCTTTGGAATAGGATTTGCACAGCATCTAAAAGAAACCTCACAGTTCAATCTTCAAGATCTTCAAACTTCAATTTCATGCATGCAAGATTTTCAATCAAAGCTCAACTCTTTATCACTTTTCAACAACTTGGTCAACTCTTGTTTTGACCCTCTTCAATTTGTTATCTCTCCTAACATATGTGCAGGTATTGAAACTGTTCATGATTGGAATCAGAAGGTGGGTCAGGATTCACCTTTGAATACTGCTTGTAAACCAGATCTCACTGATCTTTCTCAGTGTGATGCGTGTGTTGCTGCTGGATTACAGGTGAAGCAGAAGCTTGTTTCAATTGGTGGTAATTCTTCTCAGTCATTGAGTTGTTTCTACTTTGCAATTCTTTATGCTGCTGGAATTGTGAATGAGTTTGGACCTGAAAGTAATGGTGCTGTTACTTGTGCTTTTAGTTTACCTGTTTATTCACAAGTTGGTTCTGGTTCAAAGGGTCATCAGGGTCTTGTGTTTGGATTAACAGGAGCTGGTGTTGCTTTGTTTGTTATGTGTTCTTTGTTGGGTTTATATGTTTGGTGTGATAGGAAACGTATAAGGAAGAGAAAGCTTGAAACTTTTCAATTTGATTTTGATCCTGAGGAACAAGGTTCTAGGCGTAGGTTGAGGCCTAATACAGGGTCAATTTGGTACAAAATTCAGGAACTTGAGAAGGCTACTGATAATTTTTCATCCAAGAATTTCATAGGGAGAGGTGGGTTTGGTTTGGTTTTCAAGGGAACTCTGGCTGATGGATCTGTTGTTGCTGTTAAGAGGGTTTTAGAATCTGATTTTCAAGGGGATGTTGAGTTTTGTAATGAGGTTGAGATAATTAGTAATTTGAAGCATAGGAATCTGTTACCTCTTAGAGGTTGTTGTGTGGTTGATGAGAATGAAAATTATGGTGATAAAGGAAGTCAAAGATATCTTGTATATGATTACATGCCTAATGGAAACTTGGAAGATCATCTTTTTGTATCAAAGGATCCTCAAAAAGCAAACAAATCATTGACTTGGCCTCTAAGAAAAAACATAATCTTGGATGTGGGAAAAGGGTTGGCTTATTTACACTATGGAGTTAAGCCTGCAATTTATCATAGGGATATCAAAGCTACCAATATACTACTTGATGAAGATATGAGGGCAAGAGTTGCTGATTTTGGTCTTGCTAAACAAAGCAGAGAGGGTCAGTCTCATCTCACTACTAGGGTGGCTGGAACTCATGGCTATCTTGCGCCGGAATATGCGCTCTATGGTCAGCTTACAGAGAAGAGTGATGTATATAGCTTTGGTGTGGTTGTTTTGGAGATAATGTGTGGTAGGAAGGCTCTTGATTTGTCTTCGTCGGGATCTCCGCGAGCGTTCTTGATCACGGATTGGGCTTGGTCGTTGGTGAAATCGGGGAAAATAGACGAGGCTTTGGATGCTTCGCTTTTGAAAGATGAAAACACTCCTAGTGCAAATCCTAAGAGCATAATGGAAAGGTTTTTGTTGGTTGGAATTCTATGTTCTCATGTAATGGTTGCTTTGAGGCCAACAATTTCTGATGCTTTGAAGATGTTGGAAGGTGATATTGAAGTTCCTCAAATTCCAGATAGGCCTATGCCTCTTGGCCATCCAGCATTTTATAATAACGATGGAAATGGCAACACTTTTAGCATATCTCCCGCATTAAGCGGCCTCAAATTACACGCTGGCGACATGCTCAGGTCCATTAGTGAGAGATGA 1977 0.392 MKIFMMFLFMFLTMNMLMSLRNISAAPTPSPSSSSACPMDLNYVLRIHWNSSACQNFKSLSSKETNTCCASVLSLFGIGFAQHLKETSQFNLQDLQTSISCMQDFQSKLNSLSLFNNLVNSCFDPLQFVISPNICAGIETVHDWNQKVGQDSPLNTACKPDLTDLSQCDACVAAGLQVKQKLVSIGGNSSQSLSCFYFAILYAAGIVNEFGPESNGAVTCAFSLPVYSQVGSGSKGHQGLVFGLTGAGVALFVMCSLLGLYVWCDRKRIRKRKLETFQFDFDPEEQGSRRRLRPNTGSIWYKIQELEKATDNFSSKNFIGRGGFGLVFKGTLADGSVVAVKRVLESDFQGDVEFCNEVEIISNLKHRNLLPLRGCCVVDENENYGDKGSQRYLVYDYMPNGNLEDHLFVSKDPQKANKSLTWPLRKNIILDVGKGLAYLHYGVKPAIYHRDIKATNILLDEDMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSSGSPRAFLITDWAWSLVKSGKIDEALDASLLKDENTPSANPKSIMERFLLVGILCSHVMVALRPTISDALKMLEGDIEVPQIPDRPMPLGHPAFYNNDGNGNTFSISPALSGLKLHAGDMLRSISER* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g5005 658 ProSiteProfiles Protein kinase domain profile. 313 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g5005 658 CDD STKc_IRAK 319 606 - -
Mal4g5005 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 652 - -
Mal4g5005 658 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Mal4g5005 658 Gene3D Transferase(Phosphotransferase) domain 1 398 612 - -
Mal4g5005 658 SUPERFAMILY Protein kinase-like (PK-like) 294 605 IPR011009 -
Mal4g5005 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Mal4g5005 658 Pfam SPARK 32 195 IPR043891 -
Mal4g5005 658 SMART serkin_6 313 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g5005 658 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 28 652 - -
Mal4g5005 658 Pfam Protein kinase domain 315 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g5005 658 Gene3D Phosphorylase Kinase; domain 1 284 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g5005 Mal-Chr4 129947486 129949982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g5005 32 653 Receptor kinase-like Gene Family AT1G11050 64.025 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mal4g5005 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g5005 - - gmx:100806560 1038.87