Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4995 ATGAGATTGAAGAAGATGGGAAGAAGAAACGGCGGCGGCGGTGGTGGCGGCGGCGGAGGAAGATCTCTGCAACTAGCTCTTCGCCGGCGAGTTGAAACCTGCAAATCAAAGTACTCAACCGCCGAAGAAATTGTCGATCATCTTCGTTCAAACTACCCTGATTATAACCGAAAAAAGCCCCGAGAACTCCTTCGATTCGTTCAGGTTGCTCTTCAATCCTCAACACGAAACCCTAACCCTAAAAACGCCGCCGTTGATGACGGCGACTCCGACGAGGTTCAAAATTCTTCTCGAAAGAGACGTAAGGATGCTATTATCGATGAATCTGAAGATAGATTGAAAAAATTGGAAGCTCTTCACATTGAAAAGAGGATGAACACGCAGGTTCAATCATCCTCTGAAGAATCTTCTTCTTCTGATGATGGTGCAGTTTCGACTTCAGAAGACGCGATTTATAGTGAGAAAGTTGAACCTGCTTTTGATTTGATGAAAGATATGCTTAGAAATTCGTACACTGGAGTCAAGGAAGAGAACAAGGAAAAGAATGTTGAATTGGATACAGGAAATTCAAGTAAAGCTACTATTACTGTTAATGCAGATGGTGGTGAATCAAAGATAGTTTCGGTGGCGAAAGGGAAACAACAATCGAAGGGTTCCGGTTCGGGTTCTAATGTTGGCGGCAGTGGTGATGAGGTGAAAGGGAAGGGAGGGCCGATGTTTAAGGATTTGGGTGGGATGAATGGTATATTGGAGGAATTGATGATGGATATTGTGTCATTGATTAATCCTGACTTGCCTAAGCATTTAGGAGTGAAACCAGTGACTGGGATTTTGTTGCATGGACCACCTGGTTGTGGAAAGACTAGACTTGCTCATGCTATTGCTAATGAGACCGGTCTTCCTTTTCATCGTATTTCGGCTACCGAGGTGATTTCTGGTGTCTCAGGTGCATCCGAAGAATATATTAGAGAGCTTTTCGATAAAGCAAAAAGGACTGCTCCATCAATTGTTTTTATTGATGAGATTGATGCAATTGCTTCGAAAAGAGAGGATTTACAGCGTGAGATGGAGAAACGAATTGTGACCCAGTTAATGACTTCCATGGATGAACCTGAGACTTCTGATGAACCTCGTGGCTATGTTCTTGTAATTGGAGCCACAAATAGGCCTGATTCTCTTGACGCTGCTCTTAGACGACCTGGTCGGTTTGATCGCGAGTTTTTTATTGGCGTTCCTGATGAATCTGCCAGGGAGGAGATCCTTTCTGTGCTTACTCGCAATATTAAACTTGATGGTTCGTTTGATCTACGCAAAATAGCCAGGTCTACTCCAGGATTTGTTGGTGCTGATTTGGCAGCTCTGGCCAACAAAGCCGGTAATTTGGCAATGAAGAGGATAATTGATGAAAGGAAACGTGAGTTATCTCAAGCTGTCATGAGTGAGAATACAAAAGGCTGGTGGAGAGAACCATGGTCGCCTGACGAAATAACTAAGCTTGCTATCAAAATGTCCGATTTCGAGGAAGCAGTCAAAATGGTGCAACCTTCAGCAAGAAGAGAAGGGTTCTCTTCCATTCCTAATGTTAAATGGGAAGATGTTGGTGGGCTTGATAGTTTAAGGCATCAGTTTAATCGCTATATTGTACAACGTGTAAAGATACCCCAGTTTTATGAGGAAATTGGGATGAATCTTGAGTCGGGATTTTTGCTTTTTGGACCTCCAGGTTGTGGTAAAACATTGATTGCCAAGGCTGTTGCCAATGAGGCAGGAGCTAATTTCATTCATATTAAGGGACCCGAGCTTCTAAATAAATATGTTGGGGAAAGCGAGCTTGCAGTGCGGACATTGTTTAGTCGTGCAAGGACTTGTGCACCATGTGTGCTATTTTTTGATGAGGTTGATGCTCTGACTACTAAACGTGGTAAAGAAGGTGGATGGGTTGTTGAAAGACTATTGAACCAGTTGCTTATTGAGTTAGAAGGTGGTGACCAGCGGAGGGGTGTTTTTGTGATTGGTGCAACAAATAGGCCTGATGTGATGGACCCAGCTCTCTTACGGCCTGGCAGGTTTGGTAAATTGCTCTATGTTCCTCTTCCAAGCCCAGATGACCGTGTTTTGATATTGAAAGCTCTTGCAAGGAATAAACATATTGATTCTAGTGTGGATTTGAGCGCCATTGGAAGAATGGAAGCATGCGAAAACCTTAGTGGTGCTGATCTTGCAGAATTGATGAACGAAGCAGTAATGTCTGCTCTTGATGAGAAGTTGGCCTCAATTGAGACAACCTGCACTACATTGACCGATACATTGACCATTAGGACGAGTCATTTTGAAGTAGCACTAACTAAAGTTTCTCCATCTGTGTCAGCCACGCAAAGGGAATACTATGAGCGTTTGGCAACGAAACTTAAAGCGCCAGGAGCGGCACAACAATGA 2436 0.4364 MRLKKMGRRNGGGGGGGGGGRSLQLALRRRVETCKSKYSTAEEIVDHLRSNYPDYNRKKPRELLRFVQVALQSSTRNPNPKNAAVDDGDSDEVQNSSRKRRKDAIIDESEDRLKKLEALHIEKRMNTQVQSSSEESSSSDDGAVSTSEDAIYSEKVEPAFDLMKDMLRNSYTGVKEENKEKNVELDTGNSSKATITVNADGGESKIVSVAKGKQQSKGSGSGSNVGGSGDEVKGKGGPMFKDLGGMNGILEELMMDIVSLINPDLPKHLGVKPVTGILLHGPPGCGKTRLAHAIANETGLPFHRISATEVISGVSGASEEYIRELFDKAKRTAPSIVFIDEIDAIASKREDLQREMEKRIVTQLMTSMDEPETSDEPRGYVLVIGATNRPDSLDAALRRPGRFDREFFIGVPDESAREEILSVLTRNIKLDGSFDLRKIARSTPGFVGADLAALANKAGNLAMKRIIDERKRELSQAVMSENTKGWWREPWSPDEITKLAIKMSDFEEAVKMVQPSARREGFSSIPNVKWEDVGGLDSLRHQFNRYIVQRVKIPQFYEEIGMNLESGFLLFGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCAPCVLFFDEVDALTTKRGKEGGWVVERLLNQLLIELEGGDQRRGVFVIGATNRPDVMDPALLRPGRFGKLLYVPLPSPDDRVLILKALARNKHIDSSVDLSAIGRMEACENLSGADLAELMNEAVMSALDEKLASIETTCTTLTDTLTIRTSHFEVALTKVSPSVSATQREYYERLATKLKAPGAAQQ* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4995 811 MobiDBLite consensus disorder prediction 85 109 - -
Mal4g4995 811 Gene3D - 526 797 IPR027417 -
Mal4g4995 811 MobiDBLite consensus disorder prediction 124 150 - -
Mal4g4995 811 CDD AAA 276 410 - -
Mal4g4995 811 Gene3D - 699 782 - -
Mal4g4995 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 526 800 IPR027417 -
Mal4g4995 811 SMART AAA_5 273 413 IPR003593 -
Mal4g4995 811 SMART AAA_5 564 700 IPR003593 -
Mal4g4995 811 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 29 802 - -
Mal4g4995 811 MobiDBLite consensus disorder prediction 1 23 - -
Mal4g4995 811 Pfam AAA+ lid domain 720 761 IPR041569 -
Mal4g4995 811 Pfam AAA+ lid domain 434 469 IPR041569 -
Mal4g4995 811 ProSitePatterns AAA-protein family signature. 668 686 IPR003960 GO:0005524|GO:0016887
Mal4g4995 811 MobiDBLite consensus disorder prediction 69 109 - -
Mal4g4995 811 MobiDBLite consensus disorder prediction 124 146 - -
Mal4g4995 811 Coils Coil 99 126 - -
Mal4g4995 811 Pfam ATPase family associated with various cellular activities (AAA) 569 697 IPR003959 GO:0005524|GO:0016887
Mal4g4995 811 Pfam ATPase family associated with various cellular activities (AAA) 277 410 IPR003959 GO:0005524|GO:0016887
Mal4g4995 811 Gene3D - 232 410 IPR027417 -
Mal4g4995 811 MobiDBLite consensus disorder prediction 209 226 - -
Mal4g4995 811 Gene3D - 412 520 - -
Mal4g4995 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 519 IPR027417 -
Mal4g4995 811 MobiDBLite consensus disorder prediction 209 238 - -
Mal4g4995 811 ProSitePatterns AAA-protein family signature. 381 399 IPR003960 GO:0005524|GO:0016887
Mal4g4995 811 CDD AAA 566 698 - -
Mal4g4995 811 PANTHER AAA-FAMILY ATPASE 29 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4995 Mal-Chr4 129839190 129845080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4995 269 804 Calmodulin-binding Proteins AT3G56690 38.758 4.75e-119 382