Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4959 ATGTTGAAAGTGTTTCTCCGTCACAATGCATTTGGGATATCAACAACACTCTTCCACTCGCCATACCAATTTTCTCTCAAATCGCTCTACACCACCACCACCACTTTACACTCACACCCATTCGCCATGTCTTACCTCATCAACAATTTCGGATTCTCATCAGAATCCGCACTCAAAGCTTGCATAAATGTCCGTTTCAAAACCTCGGAAAACCCGATTCAGTTCTCAACTTCTTCAAAAATCACGGTTTCACTCACTCAGATATACACAACATCATCAAAAGACAACCATGGCTTCTTTCCTGCAATACCCACAAAACGCTTCTCCCAAAGTTTCAATTTTTTCTATCCAATGGTGCTTCTACCTCTGACATTGTTCGTATGGTGTTTTTCTTCCTCTGATATTGTTCCATTGTTAACTGCAAACCCTAGAATTTTAGATACTAACTTGGAGAAACGAATAATCCCTCTTTTTGAATTGTTAAGAAGGTTTTTCAAAACCAATAAGGATGCCATTGTTTACTTAATTCGACATTCCACTGCATTAGCTATTAATCCCGATCACCTTATGGTGGCTAATATCAATTTGATGACTGACTTTGGAGTTTGTGATTCTCACATTGTTACATTGCTTCAATCAAGGTCGTCTATATTTGCTTCACCGGATTTGATTAAGTCGTTGGAGGAAGTTAAGGGTTTAGGGTTTAATCCTTCAATGACTGCTTTTGGGGTTGCTTTGAGGGCCAAGACATGCATGAGTAAAAAACTTTGGGATCAGAAAGTTGATGTCTTAAAGAAATGGGGTTGGTCGGATGAAGATGCTCTACAAGCATTTAGAAAGAGACCTAAATGTATGTTATCATCCATTGATAAAATAAATCTAGTGATGAGCTTTTGGGTCGATCATTTGGGTTGGGATACTTTGGCCATTGCCAAAACGCCACATATTTTGTCGTCAAGTTTGGAAAAAACAATCATTCCAAGAGCCGTTGTTGTGCAGTTTCTTCTCAATAAAAGCTTGAGAAGGAAGAGTGCAAGCTTAACTTCTCCATTTATAATGTCTGAGAAGTTGTTTCGTGATACGTTTATAAAAGGTATCAACAAGGAGTCTTCTTATCTATTAATGTTGTATGAGGAAAAACTCAATTTTGCATACACCAGGGACAAAACATGCATGTCATGA 1182 0.3816 MLKVFLRHNAFGISTTLFHSPYQFSLKSLYTTTTTLHSHPFAMSYLINNFGFSSESALKACINVRFKTSENPIQFSTSSKITVSLTQIYTTSSKDNHGFFPAIPTKRFSQSFNFFYPMVLLPLTLFVWCFSSSDIVPLLTANPRILDTNLEKRIIPLFELLRRFFKTNKDAIVYLIRHSTALAINPDHLMVANINLMTDFGVCDSHIVTLLQSRSSIFASPDLIKSLEEVKGLGFNPSMTAFGVALRAKTCMSKKLWDQKVDVLKKWGWSDEDALQAFRKRPKCMLSSIDKINLVMSFWVDHLGWDTLAIAKTPHILSSSLEKTIIPRAVVVQFLLNKSLRRKSASLTSPFIMSEKLFRDTFIKGINKESSYLLMLYEEKLNFAYTRDKTCMS* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4959 393 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 14 385 - -
Mal4g4959 393 SMART mt_12 208 236 IPR003690 GO:0003690|GO:0006355
Mal4g4959 393 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Mal4g4959 393 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Mal4g4959 393 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Mal4g4959 393 PANTHER CGI-12 PROTEIN-RELATED 14 385 IPR003690 GO:0003690|GO:0006355
Mal4g4959 393 Gene3D Transcription termination factor 3, mitochondrial 124 369 IPR038538 -
Mal4g4959 393 Pfam mTERF 252 358 IPR003690 GO:0003690|GO:0006355
Mal4g4959 393 Pfam mTERF 130 282 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4959 Mal-Chr4 129496060 129497432 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g4959 mTERF 7.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4959 K15032 - gmx:102667698 257.684