Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4944 ATGGTGAAGCAGAACTCAATGAGTAGTAATAGCAACAACTGTGAGATAAAACTTGAGACCTTAAACACGATCCTCATAAAACCCTCCAAACCCACACCACCACATCTTCAAACCTTCAAACTCTCATTACTAGACCAACTCTCCCCTAATATCCACGGCAACACCACTTTCTTCTACCCAAACCATTCTTCTTATTACTTTGACTCATTCTCCCAAAAATCAAAACTTCTTCAAACTTCACTCTCTCAAACACTCTCCCATTTTTACCCTATTGCCGGCCGTCTCCAAGATGACACCACCATCCTCTGCACCGACGACGGCGTTTCCTTCATCGAATCACAAACCACCACCACTCTCTCCGATATCCTCACCAACCCTAATTTCAACACACTTGAATGCTTCCTCCCAACTACTGAAGAAAAACAAAACATGCTCTTAGTACTCCGGTTCACGTTATTCAGCTGCGGTTCCACCGCAATTACCGTGTCCCTCACTCACAAGCTCGTTGACTTTAATACACTCATCACATTCCTAACCACTTGGACTGCCACCACCACCGCTGGAGAACCAGTTCCACTGCCGGATTTAACCGCCGCCGCCACTTTCTTCCCTCCGAGAGAAATTCCAGGCATGTCCGCATCTGTTAAAACTTCTACCAACAAATTCACTTCTAGAAGATTCATTTTCGAAGCTTCCAAAATAGAAGAACTCAAGAGAAAAATCAAAAGTGAAATAGATTCCGAAAACGAGTTTCAGTTTCATCCTTCTAGAGTTGAAGTTGTTCTAGCACTCATTTGGAAATGCGCTCTTTCTGCATCAAGAGCTTCAAAAACGACGTCGTTTAAGCAGCGTTCAATTTTGTTCCAAGCAGTGAACCTCCGTCCACGAATGGACCCCACCATTCCAGAAACCGCCGTCGGAAACTTGGTGTGGCCGTTTGCCGTGACGGTAGAAGAAGAAAGCCACGTGGCGTTGCATGAGATGGTGAAAAGAATGAGGAAGGGTATAATAGACTTTATAGAGAAGAAAGCAGAGAGGTTTAAGGAGGAAGGTGGGTTTAAAGTGGTGATGGAGAGTTTGAAAGAGAGGGGTGAGATTTTGAAAGGGAATAATGAGAATGAGAAGGAGGGTAGTATGGTAATTTACAAATGTTCAAGTTGGTGTAAATTTCCTTTGCTTGAATTTGATTTTGGGTGGGGGAAGCCAGTGTGGAGTTGTAGTGTGAATAAGTTGGTGAGTAATACAATTGCTTTGATGGATACAAAAGATGGTGGTGGAGTTGAAGCTTTTGTTACTCTTGATGAGGATGACATGGGCTTTTTTGAACAAGATCAAGAGTTGCTACAATATGCTTTGCTTAATCCTAGTATTATTATTAGTGACAACTTGGTTACCCACCCATAA 1404 0.4295 MVKQNSMSSNSNNCEIKLETLNTILIKPSKPTPPHLQTFKLSLLDQLSPNIHGNTTFFYPNHSSYYFDSFSQKSKLLQTSLSQTLSHFYPIAGRLQDDTTILCTDDGVSFIESQTTTTLSDILTNPNFNTLECFLPTTEEKQNMLLVLRFTLFSCGSTAITVSLTHKLVDFNTLITFLTTWTATTTAGEPVPLPDLTAAATFFPPREIPGMSASVKTSTNKFTSRRFIFEASKIEELKRKIKSEIDSENEFQFHPSRVEVVLALIWKCALSASRASKTTSFKQRSILFQAVNLRPRMDPTIPETAVGNLVWPFAVTVEEESHVALHEMVKRMRKGIIDFIEKKAERFKEEGGFKVVMESLKERGEILKGNNENEKEGSMVIYKCSSWCKFPLLEFDFGWGKPVWSCSVNKLVSNTIALMDTKDGGGVEAFVTLDEDDMGFFEQDQELLQYALLNPSIIISDNLVTHP* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4944 467 Gene3D - 219 451 IPR023213 -
Mal4g4944 467 Gene3D - 15 210 IPR023213 -
Mal4g4944 467 Pfam Transferase family 17 447 - -
Mal4g4944 467 PANTHER F21J9.9 15 459 - -
Mal4g4944 467 PANTHER VINORINE SYNTHASE-RELATED 15 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4944 Mal-Chr4 129359380 129360783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4944 16 443 Monolignol Biosynthesis Gene Families AT5G48930 22.876 1.28e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4944 - - mtr:MTR_2g007880 759.985