Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4905 ATGGAACAAGTGACTTCATCATCTTCTAAAGCTTTGTTTATTTTTTGGGCTATTTTGGTGTTTGATTTGGTGCTTAAAGCTTCTTCTAATGTGGAAGGTGATGCACTGAATGCATTGAAGAGCAACTTGAACGATCCTAACAATGTTCTTCAAAGTTGGGATGCTACCCTTGTCAATCCCTGCACATGGTTTCATGTTACATGCAACGGTGATAACAGTGTAACCCGTGTTGATCTTGGAAATGCGGAACTTTCTGGTACACTGGTTTCACAACTGGGTGATCTATCAAATTTACAGTACTTGGAACTTTATAGTAATAATATAACAGGAAAAATCCCCGAAGAGCTAGGAAATTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACCGTTTAAGTGGTACCATACCGAATACATTGGGCAAGCTTGAAAAACTACGTTTCCTGCGTCTCAATAATAACACCTTGACTGGCCGCATTCCCCTGTCTTTGACAAATGTTTCTACGCTGCAAGTTCTTGATCTTTCAAACAACAATCTAGAAGGAGAAGTCCCAGTGAATGGTTCATTTTCATTATTTACTCCTATCAGTTATCAAAATAATCCTCGCTTGAAACAGCCAAAGAACGCTCCTGCACCACTTTCTCCACCAACACCCACTTCTTCAGGTAGTAGCAATACTGGAGCTATTGCTGGAGGAGTTGCTGCTGGTGCTGCTCTGTTGTTTGCAGCTCCTGCAATTGCACTTGCTTATTGGCGAAAAAGAAAACCACAGGATCATTTCTTTGACGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGATTTTCTCTACGTGAGCTGCTAGTAGCAACAGATAACTTCAGTAACAAAAATATTCTAGGTAGAGGTGGATTCGGAAAGGTTTATAAAGGACGCTTAGCTGATGGCTCACTTGTTGCTGTAAAAAGACTTAAAGAGGAACGTACACAAGGTGGGGAGCTGCAATTTCAGACGGAAGTGGAAATGATCAGCATGGCTGTACATCGTAATTTGCTTCGGCTTCGGGGATTTTGCATGACATCTACTGAACGTTTGCTTGTGTATCCTTTAATGACTAATGGAAGTGTAGCATCATGTTTACGAGAACGTAATGAGGTTGATCCGCCACTTGAGTGGCCAATGCGGAAGAATATTGCACTGGGATCTGCCAGAGGGCTTGCTTACTTGCATGATCACTGCGACCCTAAGATTATTCATCGTGATGTGAAAGCTGCAAATATATTGTTGGATGAGGAATTTGAAGCAGTTGTGGGAGATTTCGGTTTAGCAAAGCTTATGGATTACAAAGATACCCATGTTACTACTGCTGTTCGTGGTACGATTGGGCATATAGCACCTGAGTACCTGTCAACTGGAAAGTCTTCAGAAAAGACCGATGTTTTTGGATATGGTGTGATGCTTCTTGAATTAATAACTGGACAAAGGGCTTTTGATCTAGCACGTCTTGCCAATGATGATGATGTTATGTTGCTTGATTGGGTTAAAGGACTTCTCAAAGACAAGAAGTTGGAAACTCTTGTCGATGCAGAGCTAAAAGGAGATTATGATGATGAAGAGGTAGAGCAGTTAATCCAAGTGGCTTTACTATGCACACAAGGGTCCCCTGTGGAAAGACCTAAGATGTCTGAGGTGGTGAGAATGCTAGAAGGCGATGGTTTGGCCGAAAAATGGGAGCAATGGCAGAAAGAAGAGACGTACCGACAAGATTTTAACAACAACCACATGCATCACCCTAATGCAAATTGGATAGTAGTAGATTCAACTTCCCATATTCAGGCAGATGAACTCTCAGGTAACATAGCCATTGATCAGTGCTTAATCTCAAACCTCGCCGATGGAACAGAATCGGTGATGATAATACTTGGTGATACCCTTATTGCATTGAAGAGAAACTTAAATGATCCGAACAATGCTCTTGAAAGTTGGATCAATGCTACCAATGTCAATCCCTGCGGGTGGTTTCATGTTACATGCAATGATGATAAAAGTGTGATCCGTAATGATCTTGAAAATGCAAACCTTTTTGGTACACTGGTTTCAAGACTTGGTGATCTCTCAAATTTGCAGTACTTGCGTCTCAATAATAACAGCTTGACTGGAGGCATTCCCATTTCTTTGATTACTACTCTGCAAGTTCTCGATCTCTCAAACAACAATCTAGAAGGGGATATCCCAGTGAATGGTTCATTTTTATTATTTACCTCTTCCAGTTATCAAAATAATCCTCGCCTGAAACAACCAAAAATCATTCATGCGCCACTTTCTCCACCGTCACCATCTTCTTCAGGTAACAGTAATATTGGAGCTGTTGCTGCTGGTGCTGCTCTCTTGTTTGCTGCCCCTGCAATTGCACTAGTTTATTGGCAAAAAAGAAAACAACAGGGTCATTTCCTTGACGTTCCTGCTGAGCAGGATCCTGATGTTCACATTAGTCAGCTTAAAAGGTATTCTCTACGTGAACTTCTAGTAGCAACAGATAACTTCAGTAACAAAAACATTCTAGCACGTCTCGCCAATGATGATGATGTGATGTTTCTTGATTGGGTTAAAGGACTTCTCAAAGACAAGAAGTTGGAAACGCTTGTCGATGCAGAGCTAAATGGAAATTACGATGATGATGTGGTAGAGCAGTTAACCCAAGTTGCTTTACTATGCACACAAGTGTCCCCTATGGAAAGACCTAAGATGTGTGAGGTGGTTAGAATGCTAGAAGGCGATGGTTTGGCTGAAAAATGGGAGCAATGGCAGAAAGAAGAGACGTACCGACAAGATTTTAACAACAACCACATGCATCACCCTAATGCAAATTGGATAGTAGTATAG 2877 0.4143 MEQVTSSSSKALFIFWAILVFDLVLKASSNVEGDALNALKSNLNDPNNVLQSWDATLVNPCTWFHVTCNGDNSVTRVDLGNAELSGTLVSQLGDLSNLQYLELYSNNITGKIPEELGNLTNLVSLDLYLNRLSGTIPNTLGKLEKLRFLRLNNNTLTGRIPLSLTNVSTLQVLDLSNNNLEGEVPVNGSFSLFTPISYQNNPRLKQPKNAPAPLSPPTPTSSGSSNTGAIAGGVAAGAALLFAAPAIALAYWRKRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELLVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTSTERLLVYPLMTNGSVASCLRERNEVDPPLEWPMRKNIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDAELKGDYDDEEVEQLIQVALLCTQGSPVERPKMSEVVRMLEGDGLAEKWEQWQKEETYRQDFNNNHMHHPNANWIVVDSTSHIQADELSGNIAIDQCLISNLADGTESVMIILGDTLIALKRNLNDPNNALESWINATNVNPCGWFHVTCNDDKSVIRNDLENANLFGTLVSRLGDLSNLQYLRLNNNSLTGGIPISLITTLQVLDLSNNNLEGDIPVNGSFLLFTSSSYQNNPRLKQPKIIHAPLSPPSPSSSGNSNIGAVAAGAALLFAAPAIALVYWQKRKQQGHFLDVPAEQDPDVHISQLKRYSLRELLVATDNFSNKNILARLANDDDVMFLDWVKGLLKDKKLETLVDAELNGNYDDDVVEQLTQVALLCTQVSPMERPKMCEVVRMLEGDGLAEKWEQWQKEETYRQDFNNNHMHHPNANWIVV* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4905 958 SUPERFAMILY Protein kinase-like (PK-like) 854 927 IPR011009 -
Mal4g4905 958 SUPERFAMILY L domain-like 643 744 - -
Mal4g4905 958 Pfam Leucine rich repeat N-terminal domain 641 677 IPR013210 -
Mal4g4905 958 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Mal4g4905 958 MobiDBLite consensus disorder prediction 201 226 - -
Mal4g4905 958 Gene3D Transferase(Phosphotransferase) domain 1 369 586 - -
Mal4g4905 958 Gene3D Transferase(Phosphotransferase) domain 1 835 941 - -
Mal4g4905 958 Gene3D Ribonuclease Inhibitor 29 211 IPR032675 -
Mal4g4905 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Mal4g4905 958 SUPERFAMILY Protein kinase-like (PK-like) 271 567 IPR011009 -
Mal4g4905 958 SMART serkin_6 292 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4905 958 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 640 723 - -
Mal4g4905 958 PRINTS Leucine-rich repeat signature 725 738 - -
Mal4g4905 958 PRINTS Leucine-rich repeat signature 170 183 - -
Mal4g4905 958 ProSiteProfiles Leucine-rich repeat profile. 727 750 IPR001611 GO:0005515
Mal4g4905 958 PANTHER BNAA08G11770D PROTEIN 640 723 IPR031048 GO:0004675|GO:0005102|GO:0006468
Mal4g4905 958 PANTHER BNAA08G11770D PROTEIN 12 616 IPR031048 GO:0004675|GO:0005102|GO:0006468
Mal4g4905 958 ProSiteProfiles Protein kinase domain profile. 292 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4905 958 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 852 956 - -
Mal4g4905 958 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 616 - -
Mal4g4905 958 PANTHER BNAA08G11770D PROTEIN 852 956 IPR031048 GO:0004675|GO:0005102|GO:0006468
Mal4g4905 958 PANTHER BNAA08G11770D PROTEIN 708 854 IPR031048 GO:0004675|GO:0005102|GO:0006468
Mal4g4905 958 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 708 854 - -
Mal4g4905 958 SUPERFAMILY L domain-like 32 194 - -
Mal4g4905 958 Pfam Protein kinase domain 293 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4905 958 Gene3D Phosphorylase Kinase; domain 1 261 367 - -
Mal4g4905 958 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Mal4g4905 958 Gene3D Ribonuclease Inhibitor 640 784 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4905 Mal-Chr4 128748640 128760662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4905 852 957 Receptor kinase-like Gene Family AT4G33430 75.472 4.30e-45 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mal4g4905 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4905 K13416 - gmx:100800522 1038.48