Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4904 ATGGAGAGAGTGAGTTCAGCTTCTAAAGCTTCCTTTCTTTTTTTGGCTATTTTGCTGCTTCATTTGCCTCTTAAAGCTTCTTCCAATGCAGAAAGTGATGCCTTGAATGCATTCAGGAACAGCTTGAATGATCCTAACAATGTTTTTCGAAATTGGGATGCTACCCTTGTCAATCCTTGCACGTGGTTTCATGTTACATGCAATGGTGATCAAAATGTGATCAGTGTTGATCTTGGAAACATGGACCTTTCTGGTACACTGGTTTCACAACTTGGCGATCTCAAAAATTTGCAGAAATTAGAACTTTTTAATAATAGTATAACAGGAAAAATCCCAGAAGAGCTAGGAAAGTTGGCAAACTTGGAGAGCTTGGATCTTTACTTGAACAATTTAAGTGGTACCATACCGAAGACATTGGGAAACCTTCAAAAACTAAAATTCTTGCGTCTCAATAATAACAGCTTGACTGGAGGCATTCCCATTTCTTTGACAACTGTTACTACGCTGCAAGTTCTTGATCTCTCAAACAACGATCTAGAAGGGGATTTCCCAGAGACTGGTTCGTTTTTATTATTTACTCCTGCTAGTTATCATAATAATCCTCGCATGAAACAACCAAAAATCATTCCTGCGCCACTCTCTCCACCGTCACCAGCTTCTTCAGGTAGCACTAATACTGGAGCTATTGCTGGAGGAGTTGCTGCTGCTGCTGCTCTGTTGTTTGCAGCCCCTGCAATTGCACTTGTTTACTGGCGAAAAAGAAAACCACAGGATTATTTCTTTGACGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAAGTTTTCGCTACTTGAGCTTCTAGTAGCAACAGATAACTTCAGCAATGAAAACATTCTTGGTAGAGGTGGATTCGGAAAGGTTTACAAAGGACGCTTAGCTGATGGCAGTCTTGTAGCAGTAAAAAGACTTAAAGAGGAACGCGCACAGGGTGGGGAGCTGCAATTTCAGACAGAAGTGGAAATGATCAGCATGGCTGTACATCGTAATTTGCTTCGGCTTCGGGGATTTTGCATGACATCTACTGAACGTTTGCTTGTGTATCCTTTAATGACTAATGGAAGTGTAGCATCATGTTTACGAGAACGTAATGACTCTCAACCGCCGCTTGAGTGGCCAATGCGGAAGAATATTGCGCTGGGAGCTGCCAGGGGGCTTGCTTACTTGCATGATCATTGTGACCCTAAGATTATTCATCGTGATGTGAAAGCTGCAAATATACTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGATTTCGGTTTAGCAAAGCTTATGGCTTACAAAGATACCCATGTCACTACTGCTGTTCGAGGTACACTTGGGCATATACCACCTGAGTACCTGTCAACTGGAAAGTCTTCAGAAAAGACTGATGTTTTTGGATATGGTACGATGCTTCTTGAACTGACAACTGGACAGAGGGCTTTTGATCTAGCACGTCTTGCCGGTGATGATGATGTGATGTTGCTTGAATGGGTTAAAGGACATCTCATAGACAAGAAGTTGAAAACACTTGTAGATCCAGAATTAAAGGGTAATTATGATGATGATGAGGTAGAGAAACTAATCCAAGTGGCTTTACTATGCACACAAGGGTCCCCTACGGAAAGACCTAAGATGTCTGAGGTGGTTAGAATGCTAGAAGGCTATGGTTTGGCCGAAAAATGGGAGCAATGGCAGAAAGAAGAGACATACCGACAAGATTTTAACAACAACCACATGCATCACCCTAATGCAAATTGGATAGGAGTAGATTCAACTTCCCATATTCAGCCAGATGAACTCTCAGGTCCTAGATGA 1854 0.4207 MERVSSASKASFLFLAILLLHLPLKASSNAESDALNAFRNSLNDPNNVFRNWDATLVNPCTWFHVTCNGDQNVISVDLGNMDLSGTLVSQLGDLKNLQKLELFNNSITGKIPEELGKLANLESLDLYLNNLSGTIPKTLGNLQKLKFLRLNNNSLTGGIPISLTTVTTLQVLDLSNNDLEGDFPETGSFLLFTPASYHNNPRMKQPKIIPAPLSPPSPASSGSTNTGAIAGGVAAAAALLFAAPAIALVYWRKRKPQDYFFDVPAEEDPEVHLGQLKKFSLLELLVATDNFSNENILGRGGFGKVYKGRLADGSLVAVKRLKEERAQGGELQFQTEVEMISMAVHRNLLRLRGFCMTSTERLLVYPLMTNGSVASCLRERNDSQPPLEWPMRKNIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMAYKDTHVTTAVRGTLGHIPPEYLSTGKSSEKTDVFGYGTMLLELTTGQRAFDLARLAGDDDVMLLEWVKGHLIDKKLKTLVDPELKGNYDDDEVEKLIQVALLCTQGSPTERPKMSEVVRMLEGYGLAEKWEQWQKEETYRQDFNNNHMHHPNANWIGVDSTSHIQPDELSGPR* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4904 617 SUPERFAMILY Protein kinase-like (PK-like) 271 566 IPR011009 -
Mal4g4904 617 PANTHER BNAA08G11770D PROTEIN 13 617 IPR031048 GO:0004675|GO:0005102|GO:0006468
Mal4g4904 617 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 617 - -
Mal4g4904 617 SUPERFAMILY L domain-like 29 190 - -
Mal4g4904 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Mal4g4904 617 MobiDBLite consensus disorder prediction 595 617 - -
Mal4g4904 617 ProSiteProfiles Protein kinase domain profile. 291 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4904 617 MobiDBLite consensus disorder prediction 595 611 - -
Mal4g4904 617 Gene3D Transferase(Phosphotransferase) domain 1 368 585 - -
Mal4g4904 617 Pfam Protein kinase domain 292 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4904 617 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Mal4g4904 617 SMART serkin_6 291 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4904 617 Gene3D Ribonuclease Inhibitor 27 209 IPR032675 -
Mal4g4904 617 Gene3D Phosphorylase Kinase; domain 1 260 366 - -
Mal4g4904 617 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4904 Mal-Chr4 128712197 128716906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4904 13 617 Receptor kinase-like Gene Family AT4G33430 70.750 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mal4g4904 Pkinase 7.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4904 K13416 - gmx:100800522 939.102