Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4891 ATGCAAGAAGATCAGACGCCAAAAAAAGGCATGGTTTTTGATAGCTATGATGATGCTTGGAAGTTTTGGGCTGATTATGGAGGGAGAGTTGGATTTGGAGTGAGAAAACAATATGTTCACAAGAACAAAGATAACTTAGCTACTTCTTGTAGATTTGTTTGTTGCAAAGAAGGCGTACGAAAACCAGACAAACGTGATTATAAAACAACCAAGCCAAGAGCAGAGACCAGAACTAACTGTCAAGCAAGGATAGGACTTAAGAATATCGGTGGAGTTTGGATGGTGCGCGATTTTAATCCAGAACATAACCATATTATGCACATGCCAGAAACAACTCATATGTTGTCATCTCAACGAAAACTTTCAGAAATTCAATGTCAACAAATTGATCTAGCAGATGATGCTGGTCTCCAACAAAGGAATTCATTTGATTTGATGAGTAAGGAAGTGGGAGGTAGAACCAACTTGCGATTTATACGCCTTGATCAAAAGAATTATCTCCGGAAAAAAAGGGAAAGAAGTTTGGTACACGGGGAAGCCGGCTATTTGTTACAATACTTTCAGAAAATGTCAATTGTAAATCCCTCTTTCTATCATGCCTATCAAATGGATGTGGAAGATCAAATTACTAATGTGTTCTGGGCAGATACAAGGATGCTCATTGATTATGGGTATTTTGGTGATGTGGTTTCTCTTGATTCAACATATTGTACAAATACTTCATATAGACCACTTGCAGTGTTTTCAGGATTTAACCACCATCGTAAAACAGTGATTTTTGGGGATGCATTATTGTATGATGAAACAACAGAGTCATATAAGTGGCTGTTTGAAACATTTTTAGAGGCACACAAGCTGAAAATGCCTAAAACTGTTTTTACTGATCAAGCTCAAGCAATGGCAAACGCACTTGTTGAGGTTATGCCTGAAGCTTACCATGGCCTATGTACGTGGCATTTGATGCAAAATGGCATCAAACACTTAGGAAATTTAATGAAAGGCGAATCTCATTTTCTCAGTGACTTTAAGAAGTGTATGTATGGCTATGATGATGAAGAACAATTTGAAGAAGGTTGGACAAACCTCCTTGTAAACTACAAGGACTACAAGGTTGAGGAAAATACTTGGTTGAGAAGAGTCTACACTATGAAGGAGAAATGGGCATCATGTTACATGAAGAAGGCTTTTACATTAGGAATGCGAAGCACCCAACTCAGTGAAAGTGTGAACGCAAATATTAAACGTTTTATGAAGGTGAATTTGGATATTATGAAATTTTTTAAGTGTTTTGAGGATTTTATAGATGAAAAGAGATATAATGAATCAAAGTGTGAATATGAGGCACGCCAAAAGATACCAAGACTCAGAAACTCACATTCTGATATATTGCGACAAATGTCAGAGCTGTATACTCCCGCTATTTTTGATTTATTCCAAGATGAGTATGATTTGTTTGCAGCATGTTCTATGAAGAGTATCAACATACAAACATCATCAATTGATTTTGTTATTTCCATGGCAAGGGGTTTAGGGGAGTGGCGAGTGTTCTTTGATTTGGAGAAGAGATCAATTAGTTGCTCTTGTCGTAAGTTTGAGAGCTTTGGCATACTCTGTTGTCATTGTTTAAGAGTCTTTATTCATATGGATGTGAACACAGTGCCTGAACATTATATCTTGAAGAGGTGGACAAAGTCAGCAAGAAGTGGGGTCTTACCTAATGTCGATGTTAGTCATGATGTGGAAGATGTTGAATTTTCTCCAAAGCAATGCTACAAGGAAATCTGTCCTCGTTTCATTAGGATTGCCACTGAAGGATGTAGAAGTCCAGAAACATTTGCTTTTCTTACCAAAGTTGTTGATGAATTGGATAGGCTGGTACTACAGTTTCAAAACTGTCAAGTAAGTAGTGATCAAGAGGATATGTTTCTTAGCAAAATTAAAGAGATTGAAAGTAGCATTGATGGTTCAACACAAGCCAAGGGCTTTAAAAAAAGAGAAGGAAGAAAAGGTGTAAAACGTTACAGAAGTTTCTTAGAGCGTAAACTTGCCAATAAAAAGAAAAATGATGGTTCAAGTGCTTCACAAACAAAGAAGGGTAACAATTGCCAAAAAAGCAAAAATGGAGACTTAAGTGATTCACAAAAGCAAATGCAATATGAGGTGCCCAATACAAGTGGAACTATTTCGCTCAATGATGTATCCATGTACTTCTTATGGATATTTTTTGGGGTATATGTTGTGAAAAGGAGGATTAATATTTGGACAAGTAGTTATTTTGGTGTAGATTCATATAATGGTAGTATGGCACTTCTCTTGCGGTATAATGGTAGTAGGATAGTGAATTTTGAATAG 2352 0.3669 MQEDQTPKKGMVFDSYDDAWKFWADYGGRVGFGVRKQYVHKNKDNLATSCRFVCCKEGVRKPDKRDYKTTKPRAETRTNCQARIGLKNIGGVWMVRDFNPEHNHIMHMPETTHMLSSQRKLSEIQCQQIDLADDAGLQQRNSFDLMSKEVGGRTNLRFIRLDQKNYLRKKRERSLVHGEAGYLLQYFQKMSIVNPSFYHAYQMDVEDQITNVFWADTRMLIDYGYFGDVVSLDSTYCTNTSYRPLAVFSGFNHHRKTVIFGDALLYDETTESYKWLFETFLEAHKLKMPKTVFTDQAQAMANALVEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESHFLSDFKKCMYGYDDEEQFEEGWTNLLVNYKDYKVEENTWLRRVYTMKEKWASCYMKKAFTLGMRSTQLSESVNANIKRFMKVNLDIMKFFKCFEDFIDEKRYNESKCEYEARQKIPRLRNSHSDILRQMSELYTPAIFDLFQDEYDLFAACSMKSINIQTSSIDFVISMARGLGEWRVFFDLEKRSISCSCRKFESFGILCCHCLRVFIHMDVNTVPEHYILKRWTKSARSGVLPNVDVSHDVEDVEFSPKQCYKEICPRFIRIATEGCRSPETFAFLTKVVDELDRLVLQFQNCQVSSDQEDMFLSKIKEIESSIDGSTQAKGFKKREGRKGVKRYRSFLERKLANKKKNDGSSASQTKKGNNCQKSKNGDLSDSQKQMQYEVPNTSGTISLNDVSMYFLWIFFGVYVVKRRINIWTSSYFGVDSYNGSMALLLRYNGSRIVNFE* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4891 783 MobiDBLite consensus disorder prediction 688 713 - -
Mal4g4891 783 Pfam SWIM zinc finger 514 547 IPR007527 GO:0008270
Mal4g4891 783 Pfam MULE transposase domain 229 323 IPR018289 -
Mal4g4891 783 SMART 26again6 524 551 IPR006564 GO:0008270
Mal4g4891 783 MobiDBLite consensus disorder prediction 684 713 - -
Mal4g4891 783 ProSiteProfiles Zinc finger SWIM-type profile. 513 549 IPR007527 GO:0008270
Mal4g4891 783 PANTHER OS03G0181600 PROTEIN 4 628 - -
Mal4g4891 783 Pfam FAR1 DNA-binding domain 21 106 IPR004330 -
Mal4g4891 783 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 628 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4891 Mal-Chr4 128483567 128488855 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g4891 MULE 1.6e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4891 - - ccaj:109815076 931.398