Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4888 ATGAGGTTTCCCCTTTTCGTTCTTCAACTTATTACTTTTTCAGTTCTAGCTATAGCTCAAGAAGAACCTAAAGGGAACCCCAATGAGAATGGTGAAGTCCAAAATAAATCTTCAGATGATAAAAACAACAATAATTCCAATCTTTTATTATTAATTCTCAACGTGGTTCTTCTTCTTGCAATTATATTGCTATTGATTCTTTACTATAACACATCAAAAAAGCTCAACAGAATAGTCAAAGGACACATTAACACATTTCATGAACAAGAGAAAGATGTTGAAACAAGTATTGAGAAGAGGATAGAGATAGGAGAGGGAACAACAATGATGACAGTAGAAGAAAGAAAAGAGTTAATGTTCTTTAATGATGAGACAAAATTTCAAATGGGAGAACTTCTTAGAGCTTCTGCTGAGGCATTGGGTCATGGAATTATGGGGAATAGTTATAAGGCTATGTTGAATAATGGACCTACCATTGTTGTAAAGAGGTTAAGGGACTTGAAACCATTCACTAAGGAGGAATTTGCAAAGATACTGAAAATGATTGCTGATCTTAAACACCCTAATTTGTTGCCTTTGCTTGCTTACTATCATTCCAGAGATGAGAAGCTAATGCTTTATAGATATGCACAGAATGGAAACCTTTTCTCACGACTTCATGATGGAAGAGATGGAAACAGGGTTCCATTCAATTGGAACTCAAGATTATCAGTGGCAAGAGGCGTGGCTCGAGCACTAGAGTTCCTTCACCTCAACAACAAGATGCATAACATTGTCCCTCATGGAAATTTGAAGTCTTCAAATGTACTATTTGATGAAAAAGATTCAGTTCTTGTATCTGACTTTAGCCTTGCCTCATTAATAGCACAACCAATTGCAGCTCAACATATGGTTGTTTACAAATCACCTGAATATGGTTATGCAAGAAAAGTTACAATGCAATCAGATGTTTGGAGCTATGGATCACTTTTAATAGAGCTTGTAACTGGGAAAGTTTCTGTGTGCTCAGCCCCACAAGGGACTAATGGTGTAGATCTTTGTAGTTGGGTTCATAGAGCTGTGAGAGAAGAATGGACTGCTGAGATATTTGACAAAGAAATATCTTGTCAAAAAAGTGCTCTTCCTGGGATGTTAAGGTTGTTGCAGATAGCAATGAGATGCATCGAGAGGTTCCCAGAGAAACGTCCTGAGATGAAAGAGGTAGTTAGAGAAGTGGAGAAAATACAACAGGTACACTTGGTGTCTGAAGATGATGATGATATATCTTGTGATCAGTCTCTAACTGATGATTCCTTTTCAACTAGTAACTCAGGGATGTTTATTGGAGATGAAAGATAG 1338 0.37 MRFPLFVLQLITFSVLAIAQEEPKGNPNENGEVQNKSSDDKNNNNSNLLLLILNVVLLLAIILLLILYYNTSKKLNRIVKGHINTFHEQEKDVETSIEKRIEIGEGTTMMTVEERKELMFFNDETKFQMGELLRASAEALGHGIMGNSYKAMLNNGPTIVVKRLRDLKPFTKEEFAKILKMIADLKHPNLLPLLAYYHSRDEKLMLYRYAQNGNLFSRLHDGRDGNRVPFNWNSRLSVARGVARALEFLHLNNKMHNIVPHGNLKSSNVLFDEKDSVLVSDFSLASLIAQPIAAQHMVVYKSPEYGYARKVTMQSDVWSYGSLLIELVTGKVSVCSAPQGTNGVDLCSWVHRAVREEWTAEIFDKEISCQKSALPGMLRLLQIAMRCIERFPEKRPEMKEVVREVEKIQQVHLVSEDDDDISCDQSLTDDSFSTSNSGMFIGDER* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4888 445 PANTHER OS05G0588300 PROTEIN 27 440 - -
Mal4g4888 445 Pfam Protein tyrosine and serine/threonine kinase 138 404 IPR001245 GO:0004672|GO:0006468
Mal4g4888 445 SUPERFAMILY Protein kinase-like (PK-like) 138 410 IPR011009 -
Mal4g4888 445 MobiDBLite consensus disorder prediction 420 445 - -
Mal4g4888 445 MobiDBLite consensus disorder prediction 426 445 - -
Mal4g4888 445 Gene3D Transferase(Phosphotransferase) domain 1 210 430 - -
Mal4g4888 445 PANTHER RECEPTOR-LIKE KINASE 27 440 - -
Mal4g4888 445 SMART serkin_6 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4888 445 Gene3D Phosphorylase Kinase; domain 1 102 209 - -
Mal4g4888 445 ProSiteProfiles Protein kinase domain profile. 134 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4888 Mal-Chr4 128436244 128437982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4888 98 420 Receptor kinase-like Gene Family AT2G36570 39.766 8.33e-74 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal4g4888 PK_Tyr_Ser-Thr 6.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4888 - - mtr:MTR_2g008740 744.191